Useful to visualize the Poissoneity (an independent Poisson statistical framework, where each RNA measurement for each cell comes from its own independent Poisson distribution) of Unique Molecular Identifier (UMI) based single cell RNA sequencing (scRNA-seq) data, and explore cell clustering based on model departure as a novel data representation.
| Version: | 0.0.2 |
| Depends: | R (≥ 2.10) |
| Imports: | ggplot2, glmpca, Seurat, magrittr, dplyr, tidyr, purrr, Matrix, Rdpack, SeuratObject, WGCNA, broom, stats, methods, matrixStats |
| Suggests: | renv, testthat (≥ 3.0.0), vdiffr, rmarkdown, knitr, qpdf |
| Published: | 2025-12-20 |
| DOI: | 10.32614/CRAN.package.scpoisson |
| Author: | Yue Pan [aut, cre],
Justin Landis |
| Maintainer: | Yue Pan <yuep027 at gmail.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | scpoisson results |
| Reference manual: | scpoisson.html , scpoisson.pdf |
| Vignettes: |
A new Poisson probability paradigm for single cell RNA-seq clustering (source, R code) |
| Package source: | scpoisson_0.0.2.tar.gz |
| Windows binaries: | r-devel: scpoisson_0.0.2.zip, r-release: scpoisson_0.0.2.zip, r-oldrel: scpoisson_0.0.2.zip |
| macOS binaries: | r-release (arm64): scpoisson_0.0.2.tgz, r-oldrel (arm64): scpoisson_0.0.2.tgz, r-release (x86_64): scpoisson_0.0.2.tgz, r-oldrel (x86_64): scpoisson_0.0.2.tgz |
| Old sources: | scpoisson archive |
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