Functions for modelling microbial inactivation under isothermal or dynamic conditions. The calculations are based on several mathematical models broadly used by the scientific community and industry. Functions enable to make predictions for cases where the kinetic parameters are known. It also implements functions for parameter estimation for isothermal and dynamic conditions. The model fitting capabilities include an Adaptive Monte Carlo method for a Bayesian approach to parameter estimation.
| Version: | 1.3.1 |
| Depends: | R (≥ 2.10) |
| Imports: | dplyr (≥ 1.0.2), deSolve (≥ 1.11), FME (≥ 1.3.2), lazyeval (≥ 0.1.10), ggplot2 (≥ 3.3.2), MASS (≥ 7.3-39), graphics (≥ 3.1.3), stats (≥ 3.1.3), rlang (≥ 0.1.2), purrr (≥ 0.3.4) |
| Suggests: | knitr (≥ 1.30), testthat (≥ 0.9.1), rmarkdown (≥ 2.5), tidyr (≥ 1.3.0) |
| Published: | 2025-11-03 |
| DOI: | 10.32614/CRAN.package.bioinactivation |
| Author: | Alberto Garre [aut, cre], Pablo S. Fernandez [aut], Jose A. Egea [aut] |
| Maintainer: | Alberto Garre <garre.alberto at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Citation: | bioinactivation citation info |
| Materials: | README, NEWS |
| CRAN checks: | bioinactivation results |
| Reference manual: | bioinactivation.html , bioinactivation.pdf |
| Vignettes: |
bioinactivation: Software for modelling microbial inactivation (source, R code) |
| Package source: | bioinactivation_1.3.1.tar.gz |
| Windows binaries: | r-devel: bioinactivation_1.3.1.zip, r-release: bioinactivation_1.3.1.zip, r-oldrel: bioinactivation_1.3.1.zip |
| macOS binaries: | r-release (arm64): bioinactivation_1.3.1.tgz, r-oldrel (arm64): bioinactivation_1.3.1.tgz, r-release (x86_64): bioinactivation_1.3.1.tgz, r-oldrel (x86_64): bioinactivation_1.3.1.tgz |
| Old sources: | bioinactivation archive |
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