HMP: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

Version:	2.0.1
Depends:	R (≥ 3.1.0), dirmult
Imports:	ggplot2, stats, foreach, doParallel, MASS, vegan, gplots, rpart, rpart.plot, parallel, graphics, lattice
Published:	2019-08-31
DOI:	10.32614/CRAN.package.HMP
Author:	Patricio S. La Rosa, Elena Deych, Sharina Carter, Berkley Shands, Dake Yang, William D. Shannon
Maintainer:	Berkley Shands <rpackages at biorankings.com>
License:	Apache License (== 2.0)
NeedsCompilation:	no
Materials:	NEWS
CRAN checks:	HMP results

Documentation:

Reference manual:	HMP.html , HMP.pdf
Vignettes:	Figures from Reference Paper (source, R code)

Downloads:

Package source:	HMP_2.0.1.tar.gz
Windows binaries:	r-devel: HMP_2.0.1.zip, r-release: HMP_2.0.1.zip, r-oldrel: HMP_2.0.1.zip
macOS binaries:	r-release (arm64): HMP_2.0.1.tgz, r-oldrel (arm64): HMP_2.0.1.tgz, r-release (x86_64): HMP_2.0.1.tgz, r-oldrel (x86_64): HMP_2.0.1.tgz
Old sources:	HMP archive

Reverse dependencies:

Reverse imports:	HMPTrees
Reverse suggests:	crumblr

Linking:

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