CRAN Package Check Results for Maintainer ‘Tomasz Kalinowski <tomasz at posit.co>’

Last updated on 2025-05-31 13:50:18 CEST.

Package ERROR NOTE OK
guildai 13
keras 7 6
keras3 3 10
ragnar 1 2 4
Rapp 13
reticulate 2 11
tfdatasets 13

Package guildai

Current CRAN status: NOTE: 13

Version: 0.0.1
Check: Rd files
Result: NOTE checkRd: (-1) guild_merge.Rd:38: Lost braces; missing escapes or markup? 38 | \item{\code{summary_name}}{Name used for the run summary. Use '${run_id}' in the name to include the run ID.} | ^ checkRd: (-1) guild_merge_cli.Rd:88: Lost braces; missing escapes or markup? 88 | \item{summary_name}{Name used for the run summary. Use '${run_id}' in the name to include the run ID.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package keras

Current CRAN status: NOTE: 7, OK: 6

Version: 2.15.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: KerasCallback.Rd: R6Class KerasConstraint.Rd: R6Class KerasLayer.Rd: R6Class KerasWrapper.Rd: R6Class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 2.15.0
Check: installed package size
Result: NOTE installed size is 5.0Mb sub-directories of 1Mb or more: doc 2.0Mb help 2.1Mb Flavor: r-oldrel-macos-x86_64

Package keras3

Current CRAN status: NOTE: 3, OK: 10

Version: 1.4.0
Check: installed package size
Result: NOTE installed size is 14.5Mb sub-directories of 1Mb or more: doc 3.3Mb help 10.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package ragnar

Current CRAN status: ERROR: 1, NOTE: 2, OK: 4

Version: 0.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [17s/37s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ragnar) > > test_check("ragnar") *** caught segfault *** address 0x53a69fe44, cause 'memory not mapped' Traceback: 1: rapi_execute(stmt, convert_opts) 2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}) 3: doTryCatch(return(expr), name, parentenv, handler) 4: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5: tryCatchList(expr, classes, parentenv, handlers) 6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]]) 7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)}) 8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow)) 9: duckdb_execute(res) 10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow) 11: .local(conn, statement, ...) 12: dbSendQuery(conn, statement, ...) 13: dbSendQuery(conn, statement, ...) 14: dbSendStatement(conn, statement, ...) 15: dbSendStatement(conn, statement, ...) 16: dbExecute(con, "LOAD vss;") 17: dbExecute(con, "LOAD vss;") 18: ragnar_store_build_index(store) 19: eval(code, test_env) 20: eval(code, test_env) 21: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 22: doTryCatch(return(expr), name, parentenv, handler) 23: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 25: doTryCatch(return(expr), name, parentenv, handler) 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 27: tryCatchList(expr, classes, parentenv, handlers) 28: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 29: test_code(desc, code, env = parent.frame(), reporter = reporter) 30: test_that("retrieving works as expected", { store <- ragnar_store_create(embed = function(x) matrix(nrow = length(x), ncol = 100, stats::runif(100))) maybe_set_threads(store) chunks <- data.frame(text = c("foo", "bar", "faz")) ragnar_store_insert(store, chunks) ragnar_store_build_index(store) ret <- ragnar_retrieve_vss(store, "hello") expect_in("metric_value", names(ret)) expect_in("metric_name", names(ret)) expect_equal(nrow(ret), 3) expect_true(all(setdiff(names(store@schema), "embedding") %in% names(ret))) ret <- ragnar_retrieve_vss(store, "hello", top_k = 10) expect_equal(nrow(ret), 3) ret <- ragnar_retrieve_bm25(store, "foo") expect_in("metric_value", names(ret)) expect_in("metric_name", names(ret)) expect_equal(nrow(ret), 1) expect_true(all(setdiff(names(store@schema), "embedding") %in% names(ret))) ret <- ragnar_retrieve_vss_and_bm25(store, "foo") expect_equal(nrow(ret), 3) ret <- ragnar_retrieve(store, "foo") expect_equal(nrow(ret), 3)}) 31: eval(code, test_env) 32: eval(code, test_env) 33: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 34: doTryCatch(return(expr), name, parentenv, handler) 35: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 36: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 37: doTryCatch(return(expr), name, parentenv, handler) 38: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 39: tryCatchList(expr, classes, parentenv, handlers) 40: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 41: test_code(test = NULL, code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) 42: source_file(path, env = env(env), desc = desc, error_call = error_call) 43: FUN(X[[i]], ...) 44: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call) 45: doTryCatch(return(expr), name, parentenv, handler) 46: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 47: tryCatchList(expr, classes, parentenv, handlers) 48: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL}) 49: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)) 50: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call) 51: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel) 52: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") 53: test_check("ragnar") An irrecoverable exception occurred. R is aborting now ... Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.0
Check: installed package size
Result: NOTE installed size is 5.1Mb sub-directories of 1Mb or more: doc 1.8Mb help 2.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package Rapp

Current CRAN status: OK: 13

Package reticulate

Current CRAN status: NOTE: 2, OK: 11

Version: 1.42.0
Check: installed package size
Result: NOTE installed size is 6.2Mb sub-directories of 1Mb or more: libs 3.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package tfdatasets

Current CRAN status: OK: 13