CRAN Package Check Results for Maintainer ‘Ben Bolker <bolker at mcmaster.ca>’

Last updated on 2025-12-07 07:50:22 CET.

Package	ERROR	WARN	NOTE	OK
bbmle	1		1	11
broom.mixed		1	12
emdbook				13
gtools				13
margins	1			12
mbest				13
prediction				13
R2admb	1		12
reformulas				13

Package bbmle

Current CRAN status: ERROR: 1, NOTE: 1, OK: 11

Additional issues

M1mac

Version: 1.0.25.1
Check: package dependencies
Result: ERROR Packages suggested but not available for checking: 'rms', 'Hmisc', 'knitr' VignetteBuilder package required for checking but not installed: ‘knitr’ Files named as vignettes but with no recognized vignette engine: ‘inst/doc/mle2.Rnw’ ‘inst/doc/quasi.Rnw’ (Is a VignetteBuilder field missing?) See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.25.1
Check: tests
Result: NOTE Running ‘BIC.R’ [1s/1s] Comparing ‘BIC.Rout’ to ‘BIC.Rout.save’ ... OK Running ‘ICtab.R’ [1s/1s] Comparing ‘ICtab.Rout’ to ‘ICtab.Rout.save’ ... OK Running ‘RUnit-tests.R’ [0s/0s] Running ‘binomtest1.R’ [1s/2s] Comparing ‘binomtest1.Rout’ to ‘binomtest1.Rout.save’ ... OK Running ‘boundstest.R’ [0s/0s] Running ‘controleval.R’ [1s/1s] Comparing ‘controleval.Rout’ to ‘controleval.Rout.save’ ... OK Running ‘eval.R’ [1s/1s] Comparing ‘eval.Rout’ to ‘eval.Rout.save’ ... OK Running ‘formulatest.R’ [1s/2s] Comparing ‘formulatest.Rout’ to ‘formulatest.Rout.save’ ... OK Running ‘glmcomp.R’ [1s/2s] Comparing ‘glmcomp.Rout’ to ‘glmcomp.Rout.save’ ... OK Running ‘gradient_vecpar_profile.R’ [6s/9s] Comparing ‘gradient_vecpar_profile.Rout’ to ‘gradient_vecpar_profile.Rout.save’ ... OK Running ‘grtest1.R’ [1s/2s] Comparing ‘grtest1.Rout’ to ‘grtest1.Rout.save’ ... OK Running ‘impsamp.R’ [1s/2s] Running ‘methods.R’ [1s/2s] Comparing ‘methods.Rout’ to ‘methods.Rout.save’ ... OK Running ‘mortanal.R’ [1s/2s] Comparing ‘mortanal.Rout’ to ‘mortanal.Rout.save’ ... OK Running ‘optimize.R’ [1s/2s] Comparing ‘optimize.Rout’ to ‘optimize.Rout.save’ ... OK Running ‘optimizers.R’ [1s/2s] Comparing ‘optimizers.Rout’ to ‘optimizers.Rout.save’ ... OK Running ‘optimx.R’ [4s/6s] Comparing ‘optimx.Rout’ to ‘optimx.Rout.save’ ... OK Running ‘order.R’ [1s/1s] Comparing ‘order.Rout’ to ‘order.Rout.save’ ... OK Running ‘parscale.R’ [1s/1s] Comparing ‘parscale.Rout’ to ‘parscale.Rout.save’ ... OK Running ‘predict.R’ [1s/1s] Comparing ‘predict.Rout’ to ‘predict.Rout.save’ ... OK Running ‘prof_newmin.R’ [1s/1s] Running ‘prof_spec.R’ [1s/1s] Running ‘profbound.R’ [1s/1s] Comparing ‘profbound.Rout’ to ‘profbound.Rout.save’ ...36,38d35 < Warning message: < In mle2(minuslogl = function (a = NULL, b = NULL) : < convergence failure: code=52 (ERROR: ABNORMAL_TERMINATION_IN_LNSRCH) Running ‘richards.R’ [5s/6s] Comparing ‘richards.Rout’ to ‘richards.Rout.save’ ... OK Running ‘startvals.R’ [1s/1s] Comparing ‘startvals.Rout’ to ‘startvals.Rout.save’ ... OK Running ‘startvals2.R’ [1s/1s] Comparing ‘startvals2.Rout’ to ‘startvals2.Rout.save’ ... OK Running ‘test-relist1.R’ [1s/1s] Comparing ‘test-relist1.Rout’ to ‘test-relist1.Rout.save’ ... OK Running ‘testbounds.R’ [1s/1s] Comparing ‘testbounds.Rout’ to ‘testbounds.Rout.save’ ... OK Running ‘testderiv.R’ [1s/1s] Comparing ‘testderiv.Rout’ to ‘testderiv.Rout.save’ ... OK Running ‘testenv.R’ [1s/1s] Comparing ‘testenv.Rout’ to ‘testenv.Rout.save’ ... OK Running ‘testparpred.R’ [1s/2s] Comparing ‘testparpred.Rout’ to ‘testparpred.Rout.save’ ... OK Running ‘tmptest.R’ [1s/1s] Comparing ‘tmptest.Rout’ to ‘tmptest.Rout.save’ ... OK Running ‘update.R’ [1s/1s] Comparing ‘update.Rout’ to ‘update.Rout.save’ ... OK Flavor: r-release-macos-arm64

Package broom.mixed

Current CRAN status: WARN: 1, NOTE: 12

Version: 0.2.9.6
Check: DESCRIPTION meta-information
Result: NOTE Author field differs from that derived from Authors@R Author: ‘Ben Bolker [aut, cre] (<https://orcid.org/0000-0002-2127-0443>), David Robinson [aut], Dieter Menne [ctb], Jonah Gabry [ctb], Paul Buerkner [ctb], Christopher Hua [ctb], William Petry [ctb] (<https://orcid.org/0000-0002-5230-5987>), Joshua Wiley [ctb] (<https://orcid.org/0000-0002-0271-6702>), Patrick Kennedy [ctb], Eduard Szöcs [ctb] (<https://orcid.org/0000-0001-5376-1194>, BASF SE), Indrajeet Patil [ctb], Vincent Arel-Bundock [ctb] (<https://orcid.org/0000-0003-2042-7063>), Bill Denney [ctb], Cory Brunson [ctb], Joe Wasserman [ctb] (<https://orcid.org/0000-0002-9705-1853>), Alexey Stukalov [ctb], Matthieu Bruneaux [ctb]’ Authors@R: ‘Ben Bolker [aut, cre] (ORCID: <https://orcid.org/0000-0002-2127-0443>), David Robinson [aut], Dieter Menne [ctb], Jonah Gabry [ctb], Paul Buerkner [ctb], Christopher Hua [ctb], William Petry [ctb] (ORCID: <https://orcid.org/0000-0002-5230-5987>), Joshua Wiley [ctb] (ORCID: <https://orcid.org/0000-0002-0271-6702>), Patrick Kennedy [ctb], Eduard Szöcs [ctb] (ORCID: <https://orcid.org/0000-0001-5376-1194>, sponsor: BASF SE), Indrajeet Patil [ctb], Vincent Arel-Bundock [ctb] (ORCID: <https://orcid.org/0000-0003-2042-7063>), Bill Denney [ctb], Cory Brunson [ctb], Joe Wasserman [ctb] (ORCID: <https://orcid.org/0000-0002-9705-1853>), Alexey Stukalov [ctb], Matthieu Bruneaux [ctb]’ Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘glmm_tidiers.R’ ‘rstanarm_tidiers.Rd’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.2.9.6
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'knitr', 'glmmADMB', 'mediation', 'rstanarm', 'rmarkdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.9.6
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.9.6
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘glmm_tidiers.R’ ‘rstanarm_tidiers.Rd’ Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 0.2.9.6
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘glmmADMB’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.2.9.6
Check: installed package size
Result: NOTE installed size is 5.4Mb sub-directories of 1Mb or more: extdata 5.0Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package emdbook

Current CRAN status: OK: 13

Package gtools

Current CRAN status: OK: 13

Package margins

Current CRAN status: ERROR: 1, OK: 12

Version: 0.3.28
Check: package dependencies
Result: ERROR Packages suggested but not available for checking: 'knitr', 'rmarkdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Files named as vignettes but with no recognized vignette engine: ‘inst/doc/TechnicalDetails.Rnw’ (Is a VignetteBuilder field missing?) See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package mbest

Current CRAN status: OK: 13

Package prediction

Current CRAN status: OK: 13

Package R2admb

Current CRAN status: ERROR: 1, NOTE: 12

Version: 0.7.16.3
Check: Rd files
Result: NOTE checkRd: (-1) do_admb.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) do_admb.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) do_admb.Rd:49: Lost braces in \itemize; meant \describe ? checkRd: (-1) read_pars.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) read_pars.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.7.16.3
Check: package dependencies
Result: ERROR Package suggested but not available for checking: ‘knitr’ VignetteBuilder package required for checking but not installed: ‘knitr’ Files named as vignettes but with no recognized vignette engine: ‘inst/doc/R2admb.Rnw’ (Is a VignetteBuilder field missing?) See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package reformulas

Current CRAN status: OK: 13