vermeulen: Biomarker Data Set by Vermeulen et al. (2009)
The biomarker data set by Vermeulen et al. (2009)
<doi:10.1016/S1470-2045(09)70154-8> is provided. The data
source, however, is by Ruijter et al. (2013)
<doi:10.1016/j.ymeth.2012.08.011>. The original data set may
be downloaded from
<https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip>.
This data set is for a real-time quantitative polymerase chain reaction
(PCR) experiment that comprises the raw fluorescence data of 24,576
amplification curves. This data set comprises 59 genes of interest and 5
reference genes. Each gene was assessed on 366 neuroblastoma complementary
DNA (cDNA) samples and on 18 standard dilution series samples (10-fold
5-point dilution series x 3 replicates + no template controls (NTC) x 3
replicates).
| Version: |
0.1.2 |
| Depends: |
R (≥ 2.10) |
| Imports: |
memoise |
| Suggests: |
dplyr, ggplot2, rmarkdown, spelling, testthat (≥ 3.0.0), tibble |
| Published: |
2024-04-22 |
| DOI: |
10.32614/CRAN.package.vermeulen |
| Author: |
Ramiro Magno 
[aut, cre],
Pattern Institute [cph, fnd] |
| Maintainer: |
Ramiro Magno <rmagno at pattern.institute> |
| BugReports: |
https://github.com/ramiromagno/vermeulen/issues |
| License: |
CC BY 4.0 |
| URL: |
https://github.com/ramiromagno/vermeulen,
https://rmagno.eu/vermeulen/ |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Materials: |
README, NEWS |
| CRAN checks: |
vermeulen results |
Documentation:
Downloads:
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