ushr: Understanding Suppression of HIV
Analyzes longitudinal data of HIV decline in patients on antiretroviral therapy using the canonical biphasic exponential decay model (pioneered, for example, by work in Perelson et al. (1997) <doi:10.1038/387188a0>; and Wu and Ding (1999) <doi:10.1111/j.0006-341X.1999.00410.x>). Model fitting and parameter estimation are performed, with additional options to calculate the time to viral suppression. Plotting and summary tools are also provided for fast assessment of model results.
| Version: | 0.2.3 |
| Depends: | dplyr (≥ 0.8.0.1), tidyr (≥ 0.8.3), ggplot2 (≥ 3.1.1), stats |
| Suggests: | GGally (≥ 1.4.0), knitr (≥ 1.22), rmarkdown (≥ 1.12), testthat (≥ 2.2.0) |
| Published: | 2020-04-21 |
| DOI: | 10.32614/CRAN.package.ushr |
| Author: | Sinead E. Morris 
[aut, cre],
Luise Dziobek-Garrett [ctb],
Andrew Yates [ctb] |
| Maintainer: | Sinead E. Morris <sinead.morris at columbia.edu> |
| License: | MIT + file LICENSE |
| URL: | https://github.com/SineadMorris/ushr |
| NeedsCompilation: | no |
| Citation: | ushr citation info |
| Materials: | NEWS |
| CRAN checks: | ushr results |
Documentation:
| Reference manual: | ushr.html , ushr.pdf |
| Vignettes: |
ushr (source, R code) |
Downloads:
| Package source: | ushr_0.2.3.tar.gz |
| Windows binaries: | r-devel: ushr_0.2.3.zip, r-release: ushr_0.2.3.zip, r-oldrel: ushr_0.2.3.zip |
| macOS binaries: | r-release (arm64): ushr_0.2.3.tgz, r-oldrel (arm64): ushr_0.2.3.tgz, r-release (x86_64): ushr_0.2.3.tgz, r-oldrel (x86_64): ushr_0.2.3.tgz |
| Old sources: | ushr archive |
Linking:
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