treediff: Testing Differences Between Families of Trees
Perform test to detect differences in structure between families of trees. The method is based on cophenetic distances and aggregated Student's tests.
| Version: | 0.2.2 |
| Depends: | R (≥ 4.0.0) |
| Imports: | adjclust, BiocGenerics, csaw, data.table, dplyr, InteractionSet, limma, methods, stats, SummarizedExperiment, reshape2, testthat, rlang, HiCDOC, purrr |
| Suggests: | knitr, rmarkdown |
| Published: | 2026-01-30 |
| DOI: | 10.32614/CRAN.package.treediff |
| Author: | Nathalie Vialaneix
 [aut, cre],
Gwendaelle Cardenas [aut],
Marie Chavent
[aut],
Sylvain Foissac
[aut],
Pierre Neuvial
[aut],
Nathanael Randriamihamison [aut] |
| Maintainer: | Nathalie Vialaneix <nathalie.vialaneix at inrae.fr> |
| BugReports: | https://forge.inrae.fr/scales/treediff/-/issues |
| License: | GPL (≥ 3) |
| URL: | https://scales.pages-forge.inrae.fr/treediff, https://forge.inrae.fr/scales/treediff |
| NeedsCompilation: | no |
| Citation: | treediff citation info |
| Materials: | README, NEWS |
| CRAN checks: | treediff results |
Documentation:
| Reference manual: | treediff.html , treediff.pdf |
Downloads:
| Package source: | treediff_0.2.2.tar.gz |
| Windows binaries: | r-devel: treediff_0.2.2.zip, r-release: treediff_0.2.2.zip, r-oldrel: treediff_0.2.2.zip |
| macOS binaries: | r-release (arm64): treediff_0.2.2.tgz, r-oldrel (arm64): treediff_0.2.1.tgz, r-release (x86_64): treediff_0.2.2.tgz, r-oldrel (x86_64): treediff_0.2.2.tgz |
| Old sources: | treediff archive |
Linking:
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