strawr: Fast Implementation of Reading/Dump for .hic Files

API for fast data extraction for .hic files that provides programmatic access to the matrices. It doesn't store the pointer data for all the matrices, only the one queried, and currently we are only supporting matrices (not vectors).

Version:	0.0.92
Depends:	R (≥ 3.4.0)
Imports:	Rcpp
LinkingTo:	Rcpp
Published:	2024-07-16
DOI:	10.32614/CRAN.package.strawr
Author:	Neva Cherniavsky Durand [aut, cre], Muhammad Saad Shamim [aut], Aiden Lab [cph]
Maintainer:	Neva Cherniavsky Durand <neva at broadinstitute.org>
License:	MIT + file LICENSE
URL:	https://github.com/aidenlab/straw/tree/master/R
NeedsCompilation:	yes
SystemRequirements:	libcurl: libcurl-devel (rpm) or libcurl4-openssl-dev (deb)
Materials:	README
CRAN checks:	strawr results

Documentation:

Reference manual:

strawr.html , strawr.pdf

Downloads:

Package source:	strawr_0.0.92.tar.gz
Windows binaries:	r-devel: strawr_0.0.92.zip, r-release: strawr_0.0.92.zip, r-oldrel: strawr_0.0.92.zip
macOS binaries:	r-release (arm64): strawr_0.0.92.tgz, r-oldrel (arm64): strawr_0.0.92.tgz, r-release (x86_64): strawr_0.0.92.tgz, r-oldrel (x86_64): strawr_0.0.92.tgz
Old sources:	strawr archive

Reverse dependencies:

Reverse imports:

HicAggR, HiCExperiment, HiCociety, HiCPotts, mariner, plotgardener, trackViewer

Linking:

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