scMetaTraj: Metabolic State Space and Trajectory Analysis for Single-Cell Data
Provides a framework for modeling cellular metabolic states and continuous metabolic trajectories from single-cell RNA-seq data using pathway-level scoring. Enables lineage-restricted metabolic analysis, metabolic 'pseudotime' inference, module-level trend analysis, and visualization of metabolic state transitions.
| Version: | 0.1.1 |
| Depends: | R (≥ 4.1.0) |
| Imports: | stats, igraph, ggplot2, uwot, RANN, Seurat, dplyr, tidyr |
| Published: | 2026-01-27 |
| DOI: | 10.32614/CRAN.package.scMetaTraj |
| Author: | Jinwei Dai  [aut,
cre] |
| Maintainer: | Jinwei Dai <greg0453 at 163.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| CRAN checks: | scMetaTraj results |
Documentation:
| Reference manual: | scMetaTraj.html , scMetaTraj.pdf |
Downloads:
| Package source: | scMetaTraj_0.1.1.tar.gz |
| Windows binaries: | r-devel: scMetaTraj_0.1.1.zip, r-release: scMetaTraj_0.1.1.zip, r-oldrel: scMetaTraj_0.1.1.zip |
| macOS binaries: | r-release (arm64): scMetaTraj_0.1.1.tgz, r-oldrel (arm64): scMetaTraj_0.1.1.tgz, r-release (x86_64): scMetaTraj_0.1.1.tgz, r-oldrel (x86_64): scMetaTraj_0.1.1.tgz |
Linking:
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