rdiversity 2.3.0

• Fixed repartition() for non-phylogenetic metacommunities: it previously passed a bare similarity matrix to metacommunity(), which has not accepted matrices for a while
• Added tests for gen2dist(), inddiv(), repartition() and the high-level diversity-measure wrappers
• Corrected the gen2dist() documentation
• Removed the vendored binary.R library; the taxonomic and genetic bit handling is now implemented directly in base R
• Breaking: as.binary() (and its associated S3 methods) is no longer exported, as it was only ever an internal implementation detail
• Removed unused stats/utils imports
• Dropped the reshape2 dependency (superseded upstream); the melt() calls in inddiv()/subdiv()/metadiv() are replaced by a small internal base-R helper
• Migrated continuous integration from Travis CI and AppVeyor to GitHub Actions
• Added lint, pr-commands and R-hub v2 (rhub) workflows
• Formatted the codebase with styler and added a .lintr configuration so the package passes lintr::lint_package() cleanly
• Added a cran-comments.md template and tidied the repository (ignore rules, build artefacts).

rdiversity 2.2.0

• Added internal support for binary (base-2) number objects, used when encoding taxonomic and genetic data as similarities (taxid(), taxvec(), taxmask()).
• Fixed CRAN check notes and corrected the package URL and maintainer field.

rdiversity 2.1.3

• Add dependency on markdown to fix win-builder warning

rdiversity 2.1.2

• Add vignette
• Remove deprecated functionality - metacommunity() no longer allows matrices as a similarity argument
• Increase unit tests coverage

rdiversity 2.0

• Standardised metacommunity input
• New functions added to calculate genetic similarity matrices

rdiversity 1.2.1

• Fix problems that occur when user doesn’t have row names in the partition object
• Update citation

rdiversity 1.2

• Allow partition types to be input in any order, or with missing or additional types
• Tests added for new functionality

rdiversity 1.1

• Removed redundant argument chainsaw(depth)
• Renamed chainsaw(interval) to chainsaw(depth)
• Minor edits to documentation

rdiversity 1.0

• Initial submission to CRAN