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CRAN: Package rPDBapi

rPDBapi: A Comprehensive Interface for Accessing the Protein Data Bank

Provides an R interface to the 'RCSB' Protein Data Bank ('PDB') Search and Data APIs (<https://www.rcsb.org/>). Supports full-text, attribute, sequence, motif, structure, and chemical searches; retrieval of entry-, assembly-, polymer-entity-, and chemical-component-level metadata; and conversion of API responses into analysis-ready tables and typed R objects for reproducible structural bioinformatics workflows.

Version: 3.0.1
Imports: dplyr, purrr, httr, jsonlite, xml2, bio3d, magrittr, methods
Suggests: knitr, r3dmol, rmarkdown, shiny, testthat
Published: 2026-03-08
DOI: 10.32614/CRAN.package.rPDBapi
Author: Selcuk Korkmaz ORCID iD [aut, cre], Bilge Eren Yamasan ORCID iD [aut]
Maintainer: Selcuk Korkmaz <selcukorkmaz at gmail.com>
License: MIT + file LICENSE
NeedsCompilation: no
Citation: rPDBapi citation info
Materials: README, NEWS
CRAN checks: rPDBapi results

Documentation:

Reference manual: rPDBapi.html , rPDBapi.pdf
Vignettes: Accessing and Analyzing RCSB PDB Data with rPDBapi (source, R code)

Downloads:

Package source: rPDBapi_3.0.1.tar.gz
Windows binaries: r-devel: rPDBapi_3.0.1.zip, r-release: rPDBapi_3.0.1.zip, r-oldrel: rPDBapi_3.0.1.zip
macOS binaries: r-release (arm64): rPDBapi_3.0.1.tgz, r-oldrel (arm64): rPDBapi_3.0.1.tgz, r-release (x86_64): rPDBapi_3.0.1.tgz, r-oldrel (x86_64): rPDBapi_3.0.1.tgz
Old sources: rPDBapi archive

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