Fits successive Lasso models for several blocks of (omics) data with different priorities and takes the predicted values as an offset for the next block. Also offers options to deal with block-wise missingness in multi-omics data.
| Version: | 0.3.1 |
| Depends: | R (≥ 3.5.0) |
| Imports: | survival, glmnet, utils, checkmate |
| Suggests: | testthat, knitr, rmarkdown, pROC, bookdown, ipflasso |
| Published: | 2023-04-10 |
| DOI: | 10.32614/CRAN.package.prioritylasso |
| Author: | Simon Klau, Roman Hornung, Alina Bauer, Jonas Hagenberg |
| Maintainer: | Roman Hornung <hornung at ibe.med.uni-muenchen.de> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| In views: | Omics |
| CRAN checks: | prioritylasso results |
| Reference manual: | prioritylasso.html , prioritylasso.pdf |
| Vignettes: |
How prioritylasso handles blockwise missing data (source, R code) prioritylasso Vignette (source, R code) |
| Package source: | prioritylasso_0.3.1.tar.gz |
| Windows binaries: | r-devel: prioritylasso_0.3.1.zip, r-release: prioritylasso_0.3.1.zip, r-oldrel: prioritylasso_0.3.1.zip |
| macOS binaries: | r-release (arm64): prioritylasso_0.3.1.tgz, r-oldrel (arm64): prioritylasso_0.3.1.tgz, r-release (x86_64): prioritylasso_0.3.1.tgz, r-oldrel (x86_64): prioritylasso_0.3.1.tgz |
| Old sources: | prioritylasso archive |
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