annotate_compounds() example now uses a user-provided
library (lib_source = "user") instead of webchem,
eliminating network dependency and ensuring stable CRAN checks.inst/extdata/annotated_example.rds) for use in
filter_by_frequency() and
save_postvocs_results() examples.filter_by_frequency() and
save_postvocs_results() examples now load pre-annotated
data, avoiding repeated annotate_compounds() calls.prop_df in
annotate_compounds() to handle edge cases when
pc_prop() returns unexpected results.webchem
service unavailability in annotate_compounds()
example.inst/extdata/annotated_example.rds as example
data for downstream functions.batch_process_gcms(), extract_peak_areas(),
and process_gcms_txt() per CRAN review. The previously
commented examples are now uncommented and executable. # postvocs
0.2.3\dontrun{} with \donttest{} in
all examples per CRAN policy.GPL (>= 3) as requested by CRAN reviewer.batch_process_gcms() to
support exact filename mapping.extract_cas_abundance() alias has been removed.
Please use extract_peak_areas() instead.build_cas_abundance_matrix() has been renamed to
build_cas_abundance() with simplified interface.extract_peak_areas() as a more flexible
replacement for extract_cas_abundance():
build_cas_abundance() as a replacement for
build_cas_abundance_matrix():
extract_peak_areas().save_postvocs_results() for unified saving of
analysis results:
filter_by_frequency() for two-step occurrence
frequency screening:
annotate_compounds() now supports Excel input and
automatically cleans CAS numbers.filter_by_frequency() now accepts
annotate_compounds() output directly.save_postvocs_results() now checks whether a CAS column
already has a leading single quote before adding one, avoiding
duplication.extract_peak_areas().inst/extdata/txt/ with 13
sample .txt files and SampleID.xlsx) so all function
examples are now self-contained and directly runnable.
Need a high-speed mirror for your open-source project?
Contact our mirror admin team at info@clientvps.com.
This archive is provided as a free public service to the community.
Proudly supported by infrastructure from VPSPulse , RxServers , BuyNumber , UnitVPS , OffshoreName and secure payment technology by ArionPay.