Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package. Originally described in Kamvar, Tabima, and Grünwald (2014) <doi:10.7717/peerj.281> with version 2.0 described in Kamvar, Brooks, and Grünwald (2015) <doi:10.3389/fgene.2015.00208>.
| Version: | 2.9.8 |
| Depends: | R (≥ 2.15.1), adegenet (≥ 2.0.0) |
| Imports: | stats, graphics, grDevices, utils, vegan, ggplot2, ape (≥ 3.1-1), igraph (≥ 1.0.0), methods, ade4, pegas, polysat, dplyr (≥ 0.4), rlang, boot, shiny, magrittr, progressr |
| Suggests: | testthat, knitr, rmarkdown, poweRlaw, cowplot |
| Published: | 2025-08-24 |
| DOI: | 10.32614/CRAN.package.poppr |
| Author: | Zhian N. Kamvar |
| Maintainer: | Zhian N. Kamvar <zkamvar at gmail.com> |
| MailingList: | https://groups.google.com/d/forum/poppr |
| BugReports: | https://github.com/grunwaldlab/poppr/issues/ |
| License: | GPL-2 | GPL-3 |
| URL: | https://grunwaldlab.github.io/poppr/, https://github.com/grunwaldlab/poppr/, https://grunwaldlab.github.io/Population_Genetics_in_R/ |
| NeedsCompilation: | yes |
| Citation: | poppr citation info |
| Materials: | README, NEWS |
| In views: | Agriculture |
| CRAN checks: | poppr results |
| Reference manual: | poppr.html , poppr.pdf |
| Vignettes: |
Algorightms and Equations (source, R code) |
| Package source: | poppr_2.9.8.tar.gz |
| Windows binaries: | r-devel: poppr_2.9.8.zip, r-release: poppr_2.9.8.zip, r-oldrel: poppr_2.9.8.zip |
| macOS binaries: | r-release (arm64): poppr_2.9.8.tgz, r-oldrel (arm64): poppr_2.9.8.tgz, r-release (x86_64): poppr_2.9.8.tgz, r-oldrel (x86_64): poppr_2.9.8.tgz |
| Old sources: | poppr archive |
| Reverse suggests: | adegenet, AlleleShift, dartR, dartR.base, vcfR |
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