pedmut: Mutation Models for Pedigree Likelihood Computations

A collection of functions for modelling mutations in pedigrees with marker data, as used e.g. in likelihood computations with microsatellite data. Implemented models include equal, proportional and stepwise models, as well as random models for experimental work, and custom models allowing the user to apply any valid mutation matrix. Allele lumping is done following the lumpability criteria of Kemeny and Snell (1976), ISBN:0387901922.

Version:	0.9.0
Depends:	R (≥ 4.2.0)
Imports:	lpSolve
Suggests:	testthat
Published:	2025-04-29
DOI:	10.32614/CRAN.package.pedmut
Author:	Magnus Dehli Vigeland [aut, cre], Thore Egeland [ctb]
Maintainer:	Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no>
License:	GPL-3
URL:	https://github.com/magnusdv/pedmut
NeedsCompilation:	no
Language:	en-GB
Materials:	README, NEWS
CRAN checks:	pedmut results

Documentation:

Reference manual:

pedmut.html , pedmut.pdf

Downloads:

Package source:	pedmut_0.9.0.tar.gz
Windows binaries:	r-devel: pedmut_0.9.0.zip, r-release: pedmut_0.9.0.zip, r-oldrel: pedmut_0.9.0.zip
macOS binaries:	r-release (arm64): pedmut_0.9.0.tgz, r-oldrel (arm64): pedmut_0.9.0.tgz, r-release (x86_64): pedmut_0.9.0.tgz, r-oldrel (x86_64): pedmut_0.9.0.tgz
Old sources:	pedmut archive

Reverse dependencies:

Reverse imports:

KLINK, pedbuildr, pedFamilias, pedprobr, pedsuite, pedtools

Linking:

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