kegg_genes
and kegg_descriptionsmmu_kegg_genes and mmu_kegg_descriptionsreactome_genes and
reactome_descriptionsbiocarta_genes and
biocarta_descriptionsgo_all_genes and
GO_all_terms_dfbiogrid_adj_listkegg_adj_listmmu_string_adj_list
and string_adj_listexample_custom_genesets_result,
example_pathfindR_output,
example_pathfindR_output_clustered,
example_comparison_output and
example_mmu_outputexample_active_snws datapathfindR.data_updateskegg_genes
and kegg_descriptionsmmu_kegg_genes and mmu_kegg_descriptionsreactome_genes and
reactome_descriptionsbiocarta_genes and
biocarta_descriptionsgo_all_genes and
GO_all_terms_dfbiogrid_adj_listkegg_adj_listintact_adj_listRA_output,
RA_clustered, RA_comparison_output and
myeloma_outputkegg_genes
and kegg_descriptionsmmu_kegg_genes and mmu_kegg_descriptionsreactome_genes and
reactome_descriptionsbiocarta_genes and
biocarta_descriptionsgo_all_genes and
GO_all_terms_dfRA_output,
RA_clustered, RA_comparison_output and
myeloma_outputbiogrid_adj_liststring_adj_listmmu_string_adj_listgenemania_adj_listkegg_adj_listintact_adj_listcustom_resultskegg_genes and kegg_descriptions
so that there are no duplicated term descriptionsmmu_kegg_genes and
mmu_kegg_descriptions so that there are no duplicated term
descriptionspathfindR.data_updates,
containing all the data for pathfindR along with descriptions and last
update datesRA_output,
RA_clustered, RA_comparison_output and
myeloma_output after addition of the ‘support’ columnkegg_genes
and kegg_descriptionsmmu_kegg_genes and mmu_kegg_descriptionsreactome_genes and
reactome_descriptionsbiocarta_genes and
biocarta_descriptionsgo_all_genes and
GO_all_terms_dfcell_markers_gsets and
cell_markers_descriptionsbiogrid_adj_listintact_adj_listkegg_adj_listRA_output,
RA_clustered, RA_comparison_output and
myeloma_outputpathfindR to this package
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