parmigene: Parallel Mutual Information Estimation for Gene Network Reconstruction

Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).

Version:	1.1.1
Published:	2024-10-21
DOI:	10.32614/CRAN.package.parmigene
Author:	Gabriele Sales [aut, cre], Chiara Romualdi [aut]
Maintainer:	Gabriele Sales <gabriele.sales at unipd.it>
BugReports:	https://github.com/sales-lab/parmigene/issues
License:	AGPL-3
URL:	https://github.com/sales-lab/parmigene
NeedsCompilation:	yes
Materials:	README
In views:	Omics
CRAN checks:	parmigene results

Documentation:

Reference manual:

parmigene.html , parmigene.pdf

Downloads:

Package source:	parmigene_1.1.1.tar.gz
Windows binaries:	r-devel: parmigene_1.1.1.zip, r-release: parmigene_1.1.1.zip, r-oldrel: parmigene_1.1.1.zip
macOS binaries:	r-release (arm64): parmigene_1.1.1.tgz, r-oldrel (arm64): parmigene_1.1.1.tgz, r-release (x86_64): parmigene_1.1.1.tgz, r-oldrel (x86_64): parmigene_1.1.1.tgz
Old sources:	parmigene archive

Reverse dependencies:

Reverse imports:	DysPIA, MetNet, Moonlight2R, MoonlightR, PAC
Reverse suggests:	TCGAbiolinks

Linking:

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