pQTLdata: A Collection of Proteome Panels and Metadata
It aggregates protein panel data and metadata for protein quantitative trait locus (pQTL) analysis using 'pQTLtools' (<https://jinghuazhao.github.io/pQTLtools/>). The package includes data from affinity-based panels such as 'Olink' (<https://olink.com/>) and 'SomaScan' (<https://somalogic.com/>), as well as mass spectrometry-based panels from 'CellCarta' (<https://cellcarta.com/>), 'Seer' (<https://seer.bio/>) and 'SWATH-MS' (<doi:10.15252/msb.20178126>). The metadata encompasses updated annotations and publication details.
| Version: | 0.6 |
| Depends: | R (≥ 3.5.0) |
| Imports: | knitr, Rdpack |
| Suggests: | dplyr, grid, EnsDb.Hsapiens.v75, ensembldb, IRanges, org.Hs.eg.db, S4Vectors, VennDiagram |
| Published: | 2026-03-09 |
| DOI: | 10.32614/CRAN.package.pQTLdata |
| Author: | Jing Hua Zhao 
[aut, cre] (0000-0003-4930-3582),
Uwe Ligges [ctb],
Benjamin Altmann [ctb],
Brian Ripley [ctb] |
| Maintainer: | Jing Hua Zhao <jinghuazhao at hotmail.com> |
| BugReports: | https://github.com/jinghuazhao/pQTLdata/issues |
| License: | MIT + file LICENSE |
| URL: | https://jinghuazhao.github.io/pQTLdata/, https://github.com/jinghuazhao/pQTLdata |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | pQTLdata results |
Documentation:
| Reference manual: | pQTLdata.html , pQTLdata.pdf |
| Vignettes: |
pQTLdata (source, R code) |
Downloads:
| Package source: | pQTLdata_0.6.tar.gz |
| Windows binaries: | r-devel: pQTLdata_0.6.zip, r-release: pQTLdata_0.6.zip, r-oldrel: pQTLdata_0.6.zip |
| macOS binaries: | r-release (arm64): pQTLdata_0.6.tgz, r-oldrel (arm64): pQTLdata_0.6.tgz, r-release (x86_64): pQTLdata_0.6.tgz, r-oldrel (x86_64): pQTLdata_0.6.tgz |
| Old sources: | pQTLdata archive |
Linking:
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