Software to aid in modeling and analyzing mass-spectrometry-based proteome melting data. Quantitative data is imported and normalized and thermal behavior is modeled at the protein level. Methods exist for normalization, modeling, visualization, and export of results. For a general introduction to MS-based thermal profiling, see Savitski et al. (2014) <doi:10.1126/science.1255784>.
| Version: | 0.4.7 |
| Imports: | foreach, parallel, doParallel, nls2, RColorBrewer, plotrix |
| Suggests: | RSQLite, testthat, knitr, rmarkdown |
| Published: | 2017-04-27 |
| DOI: | 10.32614/CRAN.package.mstherm |
| Author: | Jeremy Volkening [aut, cre] |
| Maintainer: | Jeremy Volkening <jdv at base2bio.com> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | mstherm results |
| Reference manual: | mstherm.html , mstherm.pdf |
| Vignettes: |
Thermal proteome profiling with MSTherm (source, R code) |
| Package source: | mstherm_0.4.7.tar.gz |
| Windows binaries: | r-devel: mstherm_0.4.7.zip, r-release: mstherm_0.4.7.zip, r-oldrel: mstherm_0.4.7.zip |
| macOS binaries: | r-release (arm64): mstherm_0.4.7.tgz, r-oldrel (arm64): mstherm_0.4.7.tgz, r-release (x86_64): mstherm_0.4.7.tgz, r-oldrel (x86_64): mstherm_0.4.7.tgz |
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