microseq: Basic Biological Sequence Handling

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

Version:	2.1.7
Depends:	R (≥ 4.0.0), tibble, stringr, dplyr, rlang
Imports:	Rcpp (≥ 0.12.0), data.table (≥ 1.9.8)
LinkingTo:	Rcpp (≥ 0.12.0)
Suggests:	R.utils
Published:	2025-09-18
DOI:	10.32614/CRAN.package.microseq
Author:	Lars Snipen [aut, cre], Kristian Hovde Liland [aut]
Maintainer:	Lars Snipen <lars.snipen at nmbu.no>
License:	GPL-2
URL:	https://github.com/larssnip/microseq
NeedsCompilation:	yes
CRAN checks:	microseq results

Documentation:

Reference manual:

microseq.html , microseq.pdf

Downloads:

Package source:	microseq_2.1.7.tar.gz
Windows binaries:	r-devel: microseq_2.1.7.zip, r-release: microseq_2.1.7.zip, r-oldrel: microseq_2.1.7.zip
macOS binaries:	r-release (arm64): microseq_2.1.7.tgz, r-oldrel (arm64): microseq_2.1.7.tgz, r-release (x86_64): microseq_2.1.7.tgz, r-oldrel (x86_64): microseq_2.1.7.tgz
Old sources:	microseq archive

Reverse dependencies:

Reverse depends:	micropan
Reverse imports:	Rsearch

Linking:

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