Provides a comprehensive graphical user interface for analysis of Affymetrix, Agilent, Illumina, Nimblegen and other microarray data. It can perform miscellaneous tasks such as gene set enrichment and test analyses, identifying gene symbols and building co-expression network. It can also estimate sample size for atleast two-fold expression change. The current version is its slenderized form for compatable and flexible implementation.
| Version: | 4.0 |
| Imports: | tcltk, grDevices, utils, Biobase |
| Suggests: | tkrplot, gWidgets2, Rgraphviz, ssize, Biostrings, BiocManager, RSQLite, GEOquery, GEOmetadb, RBGL, WGCNA, KEGGREST, KEGGgraph, pdInfoBuilder, lumi, oligo, graph, affy, genefilter, beadarray, GOstats, GO.db, Category, annotate, impute, limma, graphics, methods, stats |
| Published: | 2022-04-11 |
| DOI: | 10.32614/CRAN.package.maGUI |
| Author: | Dhammapal Bharne |
| Maintainer: | Dhammapal Bharne <dhammapalb at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| SystemRequirements: | Tktable (>= 2.10) |
| In views: | Omics |
| CRAN checks: | maGUI results |
| Reference manual: | maGUI.html , maGUI.pdf |
| Package source: | maGUI_4.0.tar.gz |
| Windows binaries: | r-devel: maGUI_4.0.zip, r-release: maGUI_4.0.zip, r-oldrel: maGUI_4.0.zip |
| macOS binaries: | r-release (arm64): maGUI_4.0.tgz, r-oldrel (arm64): maGUI_4.0.tgz, r-release (x86_64): maGUI_4.0.tgz, r-oldrel (x86_64): maGUI_4.0.tgz |
| Old sources: | maGUI archive |
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