junco 0.1.6

Fixed

• Fixed s_kaplan_meier() range censoring indicator handling to no longer produce NA values in the output when either all subjects are censored or none are censored.
• Aligned a_freq_resp_var_j() with a_freq_j() by adding .formats and na_str parameters to allow user customization of output formatting and NA string representation (#67).
• Fixed the hanging indent in the first column of the body of the table (#138)
• Export leftside(), postfun_eq5d ac_blank_line and tt_to_tblfile
• Minor bugfix in DOCX exporter when calculating the number of pages (#188)
• Fixed tt_to_flextable_j() to have correct left-indentation in header col 1 (#171) and footer first line starting with newline (#171)
• Fixed relative risk difference derivations for combined column facets in a_freq_j(), a_freq_resp_var_j() and a_eair100_j() (#195)
• Fixed calculation of ‘reduce_first_col_indentation’ and section break positions in insert_keepNext_vertical_pagination() (#218)
• Fixed the little gaps in neighboring spanning headers in the docx exporter (#216)
• Fixed blank pages happening at the end of the docx (#177)
• DOCX exporter fixed watermark location in case of listings
• DOCX exporter updated table border width from 0.75 to 0.875 inches
• DOCX exporter when having vertical pagination in tables or listings, fixed the rows misalignment from page 2 and below compared to RTF
• Fixed bug in s_summarize_desc_j() when applied to almost constant data due to behavior from t.test.default() (#257)
• tt_to_tlgrtf() now is passing vectorized colwidths when exporting ‘allparts’ to match the colwidths of the individual parts (#225)

Changed

• Moved safe_t_test() from a_summarize_aval_chg_diff.R to a new file safe_t_test.R,
• Moved add_blank_line_rcells() from s_functions.R to blank_line.R.
• changed return value n for s_ancova_j into n_fit, to differentiate between these two statistics for combined function s_summarize_ancova_j() (#117)
• added default label for median_range “Median (min, max)” in junco_default_labels_start
• changed label from “experimental” to “stable” for default_stats_formats_labels
• refactored functions tt_to_flextable_j() and export_as_docx_j()
• created generic wrapper function export_TLG_as_docx(), which now calls export_as_docx_j() and export_graph_as_docx() (#173)
• Functions export_as_docx_j() and export_graph_as_docx() still exist but are now internal, i.e. not exported
• updated vignette to explain correctly how to insert newlines in the headers of Tables and Listings (#179)
• “watermark” argument in the docx exporter is now a String instead of a Boolean (#181)
• faster docx unit tests (#197)
• LS means tabulation uses very slightly updated column header (no blanks around the hyphen in “Testing-Reference”)
• Bump flextable and remove the skip() units tests (#193)
• Update colwidths tests to derive values
• Fix old TODOs in tests
• docx exporter added missing defaults (#186)
• Changed all snapshot tests to cran = TRUE
• Footnotes in docx and RTF outputs are now 1 table row/cell (#285)
• removed label “experimental” for theme_docx_default_j, tt_to_flextable_j and export_TLG_as_docx

Added

• Added multi-comparator functionality (#271)
• Hotfix: Added several new functions for creating the Vital Sign tables for core and clinpharm: a_summary_diff_mvars(), a_summary_j(), c_summary_subset_label(), filter_df_prior_afun(), prepend_label_cell(), s_diff_mean_ci(), s_summary_diff(), safe_t_test() (#304).
• Added option to perform a_summarize_ancova_j in a layout with a combined column facet (#117) + slight change in return value for s_ancova_j(), now we have n_fit instead of n returned
• Added option to switch on/off the export of the csv in both tt_to_tlgrtf() and export_as_docx_j()
• Added option to specify the output folder for the csv
• Added argument ‘validate’ to export_TLG_as_docx() and tt_to_flextable_j() (#213)
• Added “watermark” argument in the docx exporter for Figures (#181)
• Added argument mult_adj_emmeans in fit_mmrm_j() to enable (single-step or step-down) Dunnett multiplicity adjustment for LS means contrasts (p-values and confidence intervals) for more than one experimental arm within visits.
• Added option for subgroup variable in the vars argument of fit_mmrm_j() to enable fitting an overall MMRM with subgroup interaction terms.
• Export helpers for LS means tabulation: lsmeans_wide_cfun, lsmeans_wide_first_split_fun_fct, lsmeans_wide_second_split_fun_fct
• Added lifecycle to suggests

0.1.5 - 2026-03-03 (minor hotfix release)

Added and Removed

• Added new behavior for nested countsource in h_a_freq_dataprep altdf_subset (#200)

0.1.4 - 2026-02-02 (minor hotfix release)

Fixed

• “caption” paragraph style in the docx exporter is now handled by flextable (#182)
• Fixed tt_to_tlgrtf(), when exporting an empty listing do not lose Title and Footers
• Fixed tt_to_tlgrtf() argument label_width_ins which was not applying the change in the row label column width (#166).

Changed

• Reinstate rbmi as dependency

0.1.3 - 2026-01-12 (minor hotfix release)

Changed

• Address CRAN NOTES.

0.1.2 - 2025-12-10

Added and Removed

• Add a_two_tier() analysis function

• Add a_maxlev() to be able to calculate count and percentage of the maximum level of an ordered factor per subject

• Remove brackets_to_rtf()

• Export rbmi_pool() #22

• Add functionality to a_freq_j() to process val = NULL from levels specified in label_map, as well as the modified version a_freq_j_with_exclude() that allows to exclude the analysis from specified row splits. #95

• Add a_cmhrms_j() to support p-value from CMH row mean score test, as well as the modified version a_cmhrms_j_with_exclude() that allows to exclude the analysis from specified row splits. #97

• Added standard error (SE) column for each treatment arm’s least square (LS) means estimate to the summarize_lsmeans_wide() layout.

• Added the internal function do_exclude_split() to facilitate the exclusion of specified row splits from analysis functions.

• Remove some unused functions (jj_uc_map, postfun_cog, column_N, non_blank_sentinel, null_fn, unicodify

• Add extra check for existence of .alt_df_full when layout has risk difference column and a row-split (h_create_alt_df) #120.

• Add docx exporter for Tables, Listings and Figures.

• Add alignments argument in tt_to_tlgrtf()

• Removed s_test_proportion_diff() and corresponding helper functions, as they are now available as needed in the tern package.

• Added cmh_sato and cmh_mn (Cochran-Mantel-Haenszel stratified proportion difference estimation with Sato variance and Miettinen Nurminen method, respectively) method options to the s_proportion_diff_j() function.

• Added formatting function round type (#76)

• Fixed bug in s_summarize_desc_j function to handle sparse data (zero variance) cases (#78)

0.1.1 - 2025-07-28

Added

• First release of the junco package for Table and Listing (TL) Reporting
• Functions to produce tables and listings in R
• Built on the rtables package framework
• Integration with formatters, rtables, tidytlg, and tern packages

Changed

• Initial CRAN release

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.