ghypernet: Fit and Simulate Generalised Hypergeometric Ensembles of Graphs
Provides functions for model fitting and selection of generalised hypergeometric ensembles of random graphs (gHypEG). To learn how to use it, check the vignettes for a quick tutorial. Please reference its use as Casiraghi, G., Nanumyan, V. (2019) <doi:10.5281/zenodo.2555300> together with those relevant references from the one listed below. The package is based on the research developed at the Chair of Systems Design, ETH Zurich. Casiraghi, G., Nanumyan, V., Scholtes, I., Schweitzer, F. (2016) <doi:10.48550/arXiv.1607.02441>. Casiraghi, G., Nanumyan, V., Scholtes, I., Schweitzer, F. (2017) <doi:10.1007/978-3-319-67256-4_11>. Casiraghi, G., (2017) <doi:10.48550/arXiv.1702.02048>. Brandenberger, L., Casiraghi, G., Nanumyan, V., Schweitzer, F. (2019) <doi:10.1145/3341161.3342926>. Casiraghi, G. (2019) <doi:10.1007/s41109-019-0241-1>. Casiraghi, G., Nanumyan, V. (2021) <doi:10.1038/s41598-021-92519-y>. Casiraghi, G. (2021) <doi:10.1088/2632-072X/ac0493>.
| Version: | 1.1.2 |
| Depends: | R (≥ 3.0) |
| Imports: | pbmcapply, plyr, numbers, purrr, dplyr, rlang, reshape2, rootSolve, texreg, methods |
| Suggests: | BiasedUrn, igraph, knitr, rmarkdown, ggplot2, ggraph, testthat (≥ 3.0.0) |
| Published: | 2026-02-04 |
| DOI: | 10.32614/CRAN.package.ghypernet |
| Author: | Giona Casiraghi 
[aut, cre],
Vahan Nanumyan
[aut],
Laurence Brandenberger [ctb],
Giacomo Vaccario [ctb] |
| Maintainer: | Giona Casiraghi <giona at ethz.ch> |
| License: | AGPL-3 |
| URL: | https://ghyper.net |
| NeedsCompilation: | no |
| Language: | en-GB |
| Materials: | README, NEWS |
| CRAN checks: | ghypernet results |
Documentation:
| Reference manual: | ghypernet.html , ghypernet.pdf |
| Vignettes: |
Finding Significant Links with gHypEGs (source, R code) An introduction to generalized hypergeometric ensembles (gHypEG) regressions. (source, R code) ghypernet Tutorial (source, R code) |
Downloads:
| Package source: | ghypernet_1.1.2.tar.gz |
| Windows binaries: | r-devel: ghypernet_1.1.2.zip, r-release: ghypernet_1.1.2.zip, r-oldrel: ghypernet_1.1.2.zip |
| macOS binaries: | r-release (arm64): ghypernet_1.1.2.tgz, r-oldrel (arm64): ghypernet_1.1.2.tgz, r-release (x86_64): ghypernet_1.1.2.tgz, r-oldrel (x86_64): ghypernet_1.1.2.tgz |
| Old sources: | ghypernet archive |
Linking:
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