epitrix: Small Helpers and Tricks for Epidemics Analysis

A collection of small functions useful for epidemics analysis and infectious disease modelling. This includes computation of basic reproduction numbers from growth rates, generation of hashed labels to anonymize data, and fitting discretized Gamma distributions.

Version:	0.4.1
Depends:	R (≥ 3.3.0)
Imports:	sodium, distcrete, stringi, dplyr, purrr, rlang, tidyr
Suggests:	testthat, roxygen2, outbreaks, incidence (≥ 1.4.1), knitr, rmarkdown, magrittr, ggplot2, tibble, covr
Published:	2025-07-25
DOI:	10.32614/CRAN.package.epitrix
Author:	Thibaut Jombart [aut, cre], Anne Cori [aut], Zhian N. Kamvar [ctb], Dirk Schumacher [ctb], Flavio Finger [aut], Charlie Whittaker [ctb]
Maintainer:	Thibaut Jombart <thibautjombart at gmail.com>
BugReports:	https://github.com/reconhub/epitrix/issues
License:	MIT + file LICENSE
URL:	http://www.repidemicsconsortium.org/epitrix/
NeedsCompilation:	no
Materials:	NEWS
In views:	Epidemiology
CRAN checks:	epitrix results

Documentation:

Reference manual:	epitrix.html , epitrix.pdf
Vignettes:	Overview (source, R code) Estimating Incubation Period (source, R code)

Downloads:

Package source:	epitrix_0.4.1.tar.gz
Windows binaries:	r-devel: epitrix_0.4.1.zip, r-release: epitrix_0.4.1.zip, r-oldrel: epitrix_0.4.1.zip
macOS binaries:	r-release (arm64): epitrix_0.4.1.tgz, r-oldrel (arm64): epitrix_0.4.1.tgz, r-release (x86_64): epitrix_0.4.1.tgz, r-oldrel (x86_64): epitrix_0.4.1.tgz
Old sources:	epitrix archive

Reverse dependencies:

Reverse imports:

earlyR

Linking:

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