epichains: Simulating and Analysing Transmission Chain Statistics Using Branching Process Models
Provides methods to simulate and analyse the size and length of branching processes with an arbitrary offspring distribution. These can be used, for example, to analyse the distribution of chain sizes or length of infectious disease outbreaks, as discussed in Farrington et al. (2003) <doi:10.1093/biostatistics/4.2.279>.
| Version: | 0.1.1 |
| Depends: | R (≥ 3.6.0) |
| Imports: | checkmate, stats, utils |
| Suggests: | bookdown, dplyr, epicontacts, ggplot2, knitr, lubridate, rmarkdown, spelling, testthat, truncdist |
| Published: | 2024-10-14 |
| DOI: | 10.32614/CRAN.package.epichains |
| Author: | James M. Azam 
[aut, cre, cph],
Sebastian Funk
[aut, cph],
Flavio Finger
[aut],
Zhian N. Kamvar
[ctb],
Hugo Gruson [ctb,
rev],
Karim Mané [rev],
Pratik Gupte
[rev],
Joshua W. Lambert
[rev] |
| Maintainer: | James M. Azam <james.azam at lshtm.ac.uk> |
| BugReports: | https://github.com/epiverse-trace/epichains/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/epiverse-trace/epichains, https://epiverse-trace.github.io/epichains/ |
| NeedsCompilation: | no |
| Language: | en-GB |
| Materials: | README, NEWS |
| In views: | Epidemiology |
| CRAN checks: | epichains results |
Documentation:
Downloads:
| Package source: | epichains_0.1.1.tar.gz |
| Windows binaries: | r-devel: epichains_0.1.1.zip, r-release: epichains_0.1.1.zip, r-oldrel: epichains_0.1.1.zip |
| macOS binaries: | r-release (arm64): epichains_0.1.1.tgz, r-oldrel (arm64): epichains_0.1.1.tgz, r-release (x86_64): epichains_0.1.1.tgz, r-oldrel (x86_64): epichains_0.1.1.tgz |
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