Variable selection methods have been extensively developed for analyzing highdimensional omics data within both the frequentist and Bayesian frameworks. This package provides implementations of the spike-and-slab quantile (group) LASSO which have been developed along the line of Bayesian hierarchical models but deeply rooted in frequentist regularization methods by utilizing Expectation–Maximization (EM) algorithm. The spike-and-slab quantile LASSO can handle data irregularity in terms of skewness and outliers in response variables, compared to its non-robust alternative, the spike-and-slab LASSO, which has also been implemented in the package. In addition, procedures for fitting the spike-and-slab quantile group LASSO and its non-robust counterpart have been implemented in the form of quantile/least-square varying coefficient mixed effect models for high-dimensional longitudinal data. The core module of this package is developed in 'C++'.
| Version: | 0.1.6 |
| Depends: | R (≥ 4.2.0) |
| Imports: | Rcpp, glmnet |
| LinkingTo: | Rcpp, RcppArmadillo |
| Published: | 2024-09-15 |
| DOI: | 10.32614/CRAN.package.emBayes |
| Author: | Yuwen Liu [aut, cre], Cen Wu [aut] |
| Maintainer: | Yuwen Liu <yuwenliu9 at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| CRAN checks: | emBayes results |
| Reference manual: | emBayes.html , emBayes.pdf |
| Package source: | emBayes_0.1.6.tar.gz |
| Windows binaries: | r-devel: emBayes_0.1.6.zip, r-release: emBayes_0.1.6.zip, r-oldrel: emBayes_0.1.6.zip |
| macOS binaries: | r-release (arm64): emBayes_0.1.6.tgz, r-oldrel (arm64): emBayes_0.1.6.tgz, r-release (x86_64): emBayes_0.1.6.tgz, r-oldrel (x86_64): emBayes_0.1.6.tgz |
| Old sources: | emBayes archive |
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