Explicit Interaction Community Models
Available on CRAN, can be directly installed from within R.
Model fitting and species biotic interaction network topology selection for EICMs. EICMs are an extension of binomial GLMs for joint modelling of species communities, that incorporate both the effects of species biotic interactions and the effects of missing covariates. Species interactions are modelled as direct effects of each species on each of the others, and are estimated alongside the effects of missing covariates, modelled as latent factors. The package includes a Penalized Maximum Likelihood fitting function, and a Genetic Algorithm for selecting the most parsimonious species interaction network topology.
Need a high-speed mirror for your open-source project?
Contact our mirror admin team at info@clientvps.com.
This archive is provided as a free public service to the community.
Proudly supported by infrastructure from VPSPulse , RxServers , BuyNumber , UnitVPS , OffshoreName and secure payment technology by ArionPay.