directPA: Direction Analysis for Pathways and Kinases

Direction analysis is a set of tools designed to identify combinatorial effects of multiple treatments/conditions on pathways and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics data. See Yang P et al (2014) <doi:10.1093/bioinformatics/btt616>; and Yang P et al. (2016) <doi:10.1002/pmic.201600068>.

Version: 1.5.1
Depends: R (≥ 3.10.0)
Imports: grDevices, graphics, stats, plotly, calibrate
Published: 2023-11-16
Author: Pengyi Yang & Ellis Patrick
Maintainer: Pengyi Yang <yangpy7 at gmail.com>
License: GPL-3
NeedsCompilation: no
Materials: README
In views: Omics
CRAN checks: directPA results

Documentation:

Reference manual: directPA.pdf

Downloads:

Package source: directPA_1.5.1.tar.gz
Windows binaries: r-devel: directPA_1.5.1.zip, r-release: directPA_1.5.1.zip, r-oldrel: directPA_1.5.1.zip
macOS binaries: r-release (arm64): directPA_1.5.1.tgz, r-oldrel (arm64): directPA_1.5.1.tgz, r-release (x86_64): directPA_1.5.1.tgz
Old sources: directPA archive

Reverse dependencies:

Reverse imports: TOP
Reverse suggests: PhosR

Linking:

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