brainGraph: Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Version:	3.1.1
Depends:	R (≥ 3.5.0), igraph (≥ 1.2.4)
Imports:	abind, data.table (≥ 1.12.4), doParallel, foreach, grid, lattice, MASS, Matrix, methods, permute, parallel
Suggests:	Hmisc, ade4, boot, car, expm, ggplot2, ggrepel, gridExtra, mediation, oro.nifti, scales
Published:	2025-10-16
DOI:	10.32614/CRAN.package.brainGraph
Author:	Christopher G. Watson [aut, cre]
Maintainer:	Christopher G. Watson <cgwatson at bu.edu>
BugReports:	https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
License:	GPL-3
URL:	https://github.com/cwatson/brainGraph
NeedsCompilation:	no
Materials:	NEWS
CRAN checks:	brainGraph results

Documentation:

Reference manual:

brainGraph.html , brainGraph.pdf

Downloads:

Package source:	brainGraph_3.1.1.tar.gz
Windows binaries:	r-devel: brainGraph_3.1.1.zip, r-release: brainGraph_3.1.1.zip, r-oldrel: brainGraph_3.1.1.zip
macOS binaries:	r-release (arm64): brainGraph_3.1.1.tgz, r-oldrel (arm64): brainGraph_3.1.1.tgz, r-release (x86_64): brainGraph_3.1.1.tgz, r-oldrel (x86_64): brainGraph_3.1.1.tgz
Old sources:	brainGraph archive

Reverse dependencies:

Reverse imports:

etree, PopulateR, priorCON

Linking:

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