biosampleR: Biodiversity Index Calculation and Bootstrap Confidence Interval Estimation
Provides tools for the calculation of common biodiversity indices from count data. Additionally, it incorporates bootstrapping techniques to generate multiple samples, facilitating the estimation of confidence intervals around these indices. Furthermore, the package allows for the exploration of how variation in these indices changes with differing numbers of sites, making it a useful tool with which to begin an ecological analysis. Methods are based on the following references: Chao et al. (2014) <doi:10.1890/13-0133.1>, Chao and Colwell (2022) <doi:10.1002/9781119902911.ch2>, Hsieh, Ma,' and Chao (2016) <doi:10.1111/2041-210X.12613>.
| Version: | 1.0.4 |
| Depends: | R (≥ 2.10) |
| Imports: | ggplot2, stats |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0), vegan |
| Published: | 2023-09-13 |
| DOI: | 10.32614/CRAN.package.biosampleR |
| Author: | Craig Eric Simpkins
 [aut, cre] |
| Maintainer: | Craig Eric Simpkins <simpkinscraig063 at gmail.com> |
| BugReports: | https://github.com/csim063/biosampleR/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/csim063/biosampleR |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | biosampleR results |
Documentation:
| Reference manual: | biosampleR.html , biosampleR.pdf |
| Vignettes: |
biosampleR-example_workflow (source, R code) |
Downloads:
| Package source: | biosampleR_1.0.4.tar.gz |
| Windows binaries: | r-devel: biosampleR_1.0.4.zip, r-release: biosampleR_1.0.4.zip, r-oldrel: biosampleR_1.0.4.zip |
| macOS binaries: | r-release (arm64): biosampleR_1.0.4.tgz, r-oldrel (arm64): biosampleR_1.0.4.tgz, r-release (x86_64): biosampleR_1.0.4.tgz, r-oldrel (x86_64): biosampleR_1.0.4.tgz |
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