graphr() now auto-dispatches to graphs()
when passed a list of graphsgraphs() no longer requires {patchwork} to
be loaded separatelycolor to
fill using fillable shape codes (21–25) for nodes to
support fill-based colour scalesgraph_legends() helpergraphr():
"legend" (default) removes isolates from the graph but
notes them in the legend"caption" removes isolates from the graph but notes
them in the caption"keep" retains isolates in the graph as-is (closes
#12)scale_*() functions as redundant with better
theme support and match_color(){Rgraphviz} (Bioconductor) with
igraph::layout_with_sugiyama for Sugiyama/hierarchy
layouts, removing the Bioconductor dependencyplot.gof.ergm() (closes #31)
plot.goldfish.changepoints()plot.goldfish.outliers()plot.mnet() to avoid
igraph::plot.igraph() dispatchingggplot2::geom_violin() call in
graphr() to avoid warnings with ggplot2 v4.0.0graphr() internals to rely on a NULL “layout”
parameter and .infer_layout()graphr() to use match_color() for
diffusion palettesgraphs() handling of changing networksplot.ag_conv() by dropping +.ggplot()plot.ag_conv() to fix
{ggplot2} v4.0.0-related node overflow issuestocnet_theme() documentationstocnet_theme() to register a font family for
plots
{extrafont}ag_font() for retrieving the registered font
familymatch_colors() documentationis_dark() and made it vectorisedmatch_colors() and is_dark()
teststheme_*() functions in favour of
stocnet_theme()theme_*() testsstocnet_theme() testsgraphr() by using registered fonts where
availablegraphr() by using
ag_qualitative() for discrete colour scalesplot.selectionTable() and
plot.influenceTable() documentation by consolidating them
together into one help fileplot.ag_conv(), plot.ag_gof(),
and plot_interp by using registered fonts where availableplot.sienaGOF() to use lower case auxiliary
statistic descriptionres_monan_traces to
monan_convres_monan_gof to monan_gofres_ergm_gof to ergm_gofres_siena_gof to siena_gofres_siena_influence to
siena_influenceres_siena_selection to
siena_selectionplot.ag_conv() as a new plotting method for
convergence diagnostics
{MoNAn} trace objects by using
plot.ag_conv()plot.mcmc.list() for plotting MCMC samples from
ergm::ergm results objects, using
plot.ag_conv()ergm_res for testing and illustration of
plot.mcmc.list(), use ergm_res$sample to
access the MCMC sample{tidyr}, {cli}, and
{concaveman}graphr() not using theme colours for node and
edge aestheticsplot.sienaGOF() and
plot.gof.stats.monan() to use new plotting methodplot.gof.ergm() for plotting ERGM GOF
objectscumulative = FALSE by
defaultset_stocnet_theme() alias for
stocnet_theme()res_ergm_gof for testing and illustration of
plot.gof.ergm()igraph::plot(), ggraph::ggraph(), and
graphr()graphr()
and the visualisation dimensions to which they relate{patchwork},
graphs(), and grapht()graphr(), graphs(), and
grapht() from manynet for quick plotting of one or more
graphs+.ggplot() to check whether second object
inherits ggplot class (thanks @teunbrand for fixing #110)graphr() and
othersstocnet_theme() to add option to
“stocnet_theme” (previously “snet_theme”)is_dark() to check whether a theme is dark or
lightmatch_color() to return closest matching colors
from a paletteag_sequential()plot.traces.monan()plot.gof.stats.monan()stocnet_theme() for setting a theme that can then
be reused across successive plots (closes #3)
stocnet_theme("iheid") for IHEID colour
themeag_*() palettes, for example:
ag_highlight() to select the highlight colours of a
particular palettematch_color() for matching one or more hexcodes
to a palette’s offeringsplot.diff_model()plot.matrix()plot.learn_model()plot.network_measures()plot.network_motif()plot.tie_measure()plot.node_measure()plot.node_member()plot.node_members()plot.node_motif()plot.netlm()plot.netlogit()plot.network_test()plot.diffs_model()plot.sienaGOF()plot.influenceTable()plot.selectionTable()layout_tbl_graph_matching() for positioning nodes
according to their manynet::to_matching() partnerslayout_tbl_graph_layered() for
layering nodes according to a Sugiyama-type layout
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