Contains variable, diversity, and joining sequences and accompanying functions that enable both the extraction of and comparison between immune V-D-J genomic segments from a variety of species. Sources include IMGT from MP Lefranc (2009) <doi:10.1093/nar/gkn838> and Vgenerepertoire from publication DN Olivieri (2014) <doi:10.1007/s00251-014-0784-3>.
| Version: | 0.1 |
| Depends: | R (≥ 3.1.0), ape, stringdist |
| Suggests: | knitr, rmarkdown |
| Published: | 2018-12-18 |
| DOI: | 10.32614/CRAN.package.VDJgermlines |
| Author: | Alexander Yermanos |
| Maintainer: | Alexander Yermanos <ayermanos at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | VDJgermlines results |
| Reference manual: | VDJgermlines.html , VDJgermlines.pdf |
| Package source: | VDJgermlines_0.1.tar.gz |
| Windows binaries: | r-devel: VDJgermlines_0.1.zip, r-release: VDJgermlines_0.1.zip, r-oldrel: VDJgermlines_0.1.zip |
| macOS binaries: | r-release (arm64): VDJgermlines_0.1.tgz, r-oldrel (arm64): VDJgermlines_0.1.tgz, r-release (x86_64): VDJgermlines_0.1.tgz, r-oldrel (x86_64): VDJgermlines_0.1.tgz |
Please use the canonical form https://CRAN.R-project.org/package=VDJgermlines to link to this page.
Need a high-speed mirror for your open-source project?
Contact our mirror admin team at info@clientvps.com.
This archive is provided as a free public service to the community.
Proudly supported by infrastructure from VPSPulse , RxServers , BuyNumber , UnitVPS , OffshoreName and secure payment technology by ArionPay.