Provides tools for molecule-oriented and reaction-centred analysis of root exudate datasets. It supports structural matching based on 'PubChem', calculation of molecular descriptors, and inference of candidate microbe-associated metabolic reactions using Kyoto Encyclopedia of Genes and Genomes ('KEGG') identifiers and Enzyme Commission ('EC') numbers. For background on these databases, see Kanehisa et al. (2023) <doi:10.1093/nar/gkac963> and Kim et al. (2023) <doi:10.1093/nar/gkac956>.
| Version: | 0.1.4 |
| Depends: | R (≥ 4.1.0) |
| Imports: | readxl, dplyr, purrr, stringr, tibble, writexl, webchem, rlang |
| Suggests: | rcdk, rcdklibs |
| Published: | 2026-05-19 |
| DOI: | 10.32614/CRAN.package.REFT (may not be active yet) |
| Author: | Guozhen Gao [aut, cre] |
| Maintainer: | Guozhen Gao <gaoguozhen889 at gmail.com> |
| BugReports: | https://github.com/gaoguozhen1/REFT/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/gaoguozhen1/REFT |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | REFT results |
| Reference manual: | REFT.html , REFT.pdf |
| Package source: | REFT_0.1.4.tar.gz |
| Windows binaries: | r-devel: not available, r-release: REFT_0.1.4.zip, r-oldrel: REFT_0.1.4.zip |
| macOS binaries: | r-release (arm64): REFT_0.1.4.tgz, r-oldrel (arm64): REFT_0.1.4.tgz, r-release (x86_64): REFT_0.1.4.tgz, r-oldrel (x86_64): REFT_0.1.4.tgz |
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