PoweREST: A Bootstrap-Based Power Estimation Tool for Spatial Transcriptomics
Power estimation and sample size calculation for 10X Visium Spatial Transcriptomics data to detect differential expressed genes between two conditions based on bootstrap resampling. See Shui et al. (2025) <doi:10.1371/journal.pcbi.1013293> for method details.
| Version: | 0.1.2 |
| Depends: | R (≥ 2.10) |
| Imports: | scam, dplyr, resample, xgboost, magrittr, ggplot2 |
| Suggests: | patchwork, boot, fields, rayrender, tidyr, plotly, rayshader, Seurat, knitr, rmarkdown |
| Published: | 2025-12-09 |
| DOI: | 10.32614/CRAN.package.PoweREST |
| Author: | Lan Shui  [aut,
cre] |
| Maintainer: | Lan Shui <Lan.Shui at uth.tmc.edu> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| CRAN checks: | PoweREST results |
Documentation:
| Reference manual: | PoweREST.html , PoweREST.pdf |
| Vignettes: |
PoweREST (source, R code) |
Downloads:
| Package source: | PoweREST_0.1.2.tar.gz |
| Windows binaries: | r-devel: PoweREST_0.1.2.zip, r-release: PoweREST_0.1.2.zip, r-oldrel: PoweREST_0.1.2.zip |
| macOS binaries: | r-release (arm64): PoweREST_0.1.2.tgz, r-oldrel (arm64): PoweREST_0.1.2.tgz, r-release (x86_64): PoweREST_0.1.2.tgz, r-oldrel (x86_64): PoweREST_0.1.2.tgz |
| Old sources: | PoweREST archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=PoweREST to link to this page.