Provides functions to aid the identification of probable/possible
duplicates in Plant Genetic Resources (PGR) collections using
'passport databases' comprising of information records of each constituent
sample. These include methods for cleaning the data, creation of a
searchable Key Word in Context (KWIC) index of keywords associated with
sample records and the identification of nearly identical records with
similar information by fuzzy, phonetic and semantic matching of keywords.
| Version: |
0.2.4.0 |
| Depends: |
R (≥ 3.0.2) |
| Imports: |
data.table (≥ 1.9.3), igraph, stringdist (≥ 0.9.4), stringi, ggplot2, grid, gridExtra, methods, utils, stats |
| Suggests: |
diagram, wordcloud, microbenchmark, XML, httr, RCurl, knitr, rmarkdown, pander |
| Published: |
2025-12-14 |
| DOI: |
10.32614/CRAN.package.PGRdup |
| Author: |
J. Aravind  [aut,
cre],
J. Radhamani [aut],
Kalyani Srinivasan [aut],
B. Ananda Subhash [aut],
Rishi Kumar Tyagi [aut],
ICAR-NBGPR [cph] (url: https://nbpgr.org.in/),
Maurice Aubrey [ctb] (Double Metaphone),
Kevin Atkinson [ctb] (Double Metaphone),
Lawrence Philips [ctb] (Double Metaphone) |
| Maintainer: |
J. Aravind <j.aravind at icar.org.in> |
| BugReports: |
https://github.com/aravind-j/PGRdup/issues |
| License: |
GPL-2 | GPL-3 |
| Copyright: |
2014-2025, ICAR-NBPGR |
| URL: |
https://cran.r-project.org/package=PGRdup,
https://github.com/aravind-j/PGRdup,
https://doi.org/10.5281/zenodo.841963,
https://aravind-j.github.io/PGRdup/,
https://www.rdocumentation.org/packages/PGRdup |
| NeedsCompilation: |
yes |
| Citation: |
PGRdup citation info |
| Materials: |
README, NEWS |
| In views: |
Agriculture |
| CRAN checks: |
PGRdup results |