OmopSketch: Characterise Tables of an OMOP Common Data Model Instance

Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.

Version: 0.2.0
Depends: R (≥ 2.10)
Imports: CDMConnector (≥ 1.3.0), cli, clock, CohortConstructor (≥ 0.3.1), dplyr, glue, lifecycle, omopgenerics (≥ 0.4.1), PatientProfiles (≥ 1.2.1), purrr, rlang, stringr, tibble, tidyr
Suggests: CodelistGenerator, DBI, duckdb, flextable, gt, here, knitr, lubridate, odbc, remotes, rmarkdown, RPostgres, testthat (≥ 3.0.0), withr, omock (≥ 0.3.0), covr, ggplot2, visOmopResults (≥ 0.5.0)
Published: 2025-01-08
DOI: 10.32614/CRAN.package.OmopSketch
Author: Marta Alcalde-Herraiz ORCID iD [aut], Kim Lopez-Guell ORCID iD [aut], Elin Rowlands ORCID iD [aut], Cecilia Campanile ORCID iD [aut, cre], Edward Burn ORCID iD [aut], Martí Català ORCID iD [aut]
Maintainer: Cecilia Campanile <cecilia.campanile at ndorms.ox.ac.uk>
BugReports: https://github.com/OHDSI/OmopSketch/issues
License: Apache License (≥ 2)
URL: https://OHDSI.github.io/OmopSketch/
NeedsCompilation: no
Materials: README
CRAN checks: OmopSketch results [issues need fixing before 2025-01-24]

Documentation:

Reference manual: OmopSketch.pdf
Vignettes: A-summarise_clinical_tables_records (source, R code)
B-summarise_concept_counts (source, R code)

Downloads:

Package source: OmopSketch_0.2.0.tar.gz
Windows binaries: r-devel: OmopSketch_0.2.0.zip, r-release: OmopSketch_0.2.0.zip, r-oldrel: OmopSketch_0.2.0.zip
macOS binaries: r-release (arm64): OmopSketch_0.2.0.tgz, r-oldrel (arm64): OmopSketch_0.2.0.tgz, r-release (x86_64): OmopSketch_0.2.0.tgz, r-oldrel (x86_64): OmopSketch_0.2.0.tgz
Old sources: OmopSketch archive

Reverse dependencies:

Reverse imports: PhenotypeR
Reverse suggests: OmopViewer

Linking:

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