MetAlyzer: Read and Analyze 'MetIDQ™' Software Output Files
The 'MetAlyzer' S4 object provides methods to read and reformat metabolomics data for convenient data handling, statistics and downstream analysis. The resulting format corresponds to input data of the Shiny app 'MetaboExtract' (<https://www.metaboextract.shiny.dkfz.de/MetaboExtract/>).
| Version: | 1.1.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | SummarizedExperiment, openxlsx, stringr, dplyr, tidyr, tibble, agricolae, ggplot2, ggrepel, utils, rlang, data.table, S4Vectors, viridis, viridisLite, plotly, limma |
| Suggests: | rmarkdown, knitr |
| Published: | 2024-12-06 |
| DOI: | 10.32614/CRAN.package.MetAlyzer |
| Author: | Nils Mechtel 
[aut, cre],
Luis Herfurth
[aut],
Carolin Andresen
[aut],
Daniel Huebschmann
[aut] |
| Maintainer: | Nils Mechtel <nils.mech at gmail.com> |
| BugReports: | https://github.com/nilsmechtel/MetAlyzer/issues |
| License: | GPL-3 |
| URL: | https://github.com/nilsmechtel/MetAlyzer |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README, NEWS |
| CRAN checks: | MetAlyzer results |
Documentation:
| Reference manual: | MetAlyzer.html , MetAlyzer.pdf |
| Vignettes: |
Read and Analyze MetIDQ™ Software Output Files (source, R code) |
Downloads:
| Package source: | MetAlyzer_1.1.0.tar.gz |
| Windows binaries: | r-devel: MetAlyzer_1.1.0.zip, r-release: MetAlyzer_1.1.0.zip, r-oldrel: MetAlyzer_1.1.0.zip |
| macOS binaries: | r-release (arm64): MetAlyzer_1.1.0.tgz, r-oldrel (arm64): MetAlyzer_1.1.0.tgz, r-release (x86_64): MetAlyzer_1.1.0.tgz, r-oldrel (x86_64): MetAlyzer_1.1.0.tgz |
| Old sources: | MetAlyzer archive |
Linking:
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