KnockoffHybrid: Hybrid Analysis of Population and Trio Data with Knockoff Statistics for FDR Control
Identification of putative causal variants in genome-wide association studies using hybrid analysis of both the trio and population designs. The package implements the method in the paper: Yang, Y., Wang, Q., Wang, C., Buxbaum, J., & Ionita-Laza, I. (2024). KnockoffHybrid: A knockoff framework for hybrid analysis of trio and population designs in genome-wide association studies. The American Journal of Human Genetics, in press.
| Version: | 1.0.1 |
| Depends: | R (≥ 2.10) |
| Imports: | glmnet, SPAtest |
| Published: | 2024-06-11 |
| DOI: | 10.32614/CRAN.package.KnockoffHybrid |
| Author: | Yi Yang  [aut,
cre] |
| Maintainer: | Yi Yang <yi.yang at cityu.edu.hk> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | KnockoffHybrid results |
Documentation:
| Reference manual: | KnockoffHybrid.html , KnockoffHybrid.pdf |
Downloads:
| Package source: | KnockoffHybrid_1.0.1.tar.gz |
| Windows binaries: | r-devel: KnockoffHybrid_1.0.1.zip, r-release: KnockoffHybrid_1.0.1.zip, r-oldrel: KnockoffHybrid_1.0.1.zip |
| macOS binaries: | r-release (arm64): KnockoffHybrid_1.0.1.tgz, r-oldrel (arm64): KnockoffHybrid_1.0.1.tgz, r-release (x86_64): KnockoffHybrid_1.0.1.tgz, r-oldrel (x86_64): KnockoffHybrid_1.0.1.tgz |
| Old sources: | KnockoffHybrid archive |
Linking:
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