Tools to run genome-wide association study (GWAS) and genome-wide by environment interaction study (GWEIS) scans using the genetic data stored in a binary dosage file. The user provides a data frame with the subject's covariate data and the information about the binary dosage file returned by the BinaryDosage::getbdinfo() routine.
| Version: | 3.0.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | lsReg, BinaryDosage |
| Suggests: | testthat (≥ 2.1.0), knitr, rmarkdown |
| Published: | 2026-05-01 |
| DOI: | 10.32614/CRAN.package.GxEScanR |
| Author: | John Morrison [aut, cre], W. James Gauderman [aut], NCI [fnd] (CA196559), NCI [fnd] (CA201407), NIEHS [fnd] (ES007048), NHLBI [fnd] (HL115606) |
| Maintainer: | John Morrison <jmorr at usc.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README, NEWS |
| CRAN checks: | GxEScanR results |
| Reference manual: | GxEScanR.html , GxEScanR.pdf |
| Vignettes: |
Using GxEScanR (source, R code) |
| Package source: | GxEScanR_3.0.0.tar.gz |
| Windows binaries: | r-devel: GxEScanR_3.0.0.zip, r-release: GxEScanR_3.0.0.zip, r-oldrel: GxEScanR_3.0.0.zip |
| macOS binaries: | r-release (arm64): GxEScanR_3.0.0.tgz, r-oldrel (arm64): GxEScanR_3.0.0.tgz, r-release (x86_64): GxEScanR_3.0.0.tgz, r-oldrel (x86_64): GxEScanR_3.0.0.tgz |
| Old sources: | GxEScanR archive |
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