Two new options are available on the IncidenceDesign: - firstAtRisk:
limits TARs to the first continuous TAR period - firstPostOutcome: Only
uses outcomes that occur within clean window of TAR or later.
CohortIncidence 4.1.1
Bug Fixes
Fixed issue to exclude persons who TARs push them out of cohort
observation period.
# CohortIncidence 4.1.0
New Features
You can now specify age breaks as a list via the ageBreakList
paramater in StrataSettings.
Bug Fixes
Fixed issue where excluded persons was not calculated correctly.
Adjusted validation of name properties to be ‘string’.
# CohortIncidence 4.0.0
Major Changes
The results DDL has been split into 5 tables: - incidence_summary -
target_def - outcome_def - tar_def - age_group_def - subgroup_def
executeAnalysis() will return a list of dataframes with
the following fields: - incidenceSummary - targetDef - outcomeDef -
tarDef - ageGroupDef - subgroupDef
These dataframes follow the same structure as the corresponding
table.
# CohortIncidence 3.3.1
Bug Fixes
Fixed summing large number (bigint) of days by casting to
bigint.
# CohortIncidence 3.3.0
Major Changes
Performance release: improved IR Calculation SQL.
# CohortIncidence 3.2.0
Major Changes
Performance release: improved era-building SQL to improve
performance.
# CohortIncidence 3.1.5
Bug Fixes
Fixed strata settings when index-year strata was applied when gender
was applied.
# CohortIncidence 3.1.4
Bug Fixes
Fixed non-deterministic query when finding end dates of eras.
# CohortIncidence 3.1.3
Bug Fixes
Fixed Bug: Encode input strings to prevent sql injection (#29)
Fixed Bug: Truncate target and outcome names to 255 characters.
# CohortIncidence 3.1.2
Bug Fixes
Fixed bug: Exlusion time was not being calculated when clean window
= 0.
# CohortIncidence 3.1.1
Bug Fixes
Fixed SQL error when all strata settings were set to F.
# CohortIncidence 3.1.0
Major Changes
Implemented StudyWindow setting: TAR will be censored at the study
window end, and excluded if TAR did not start during the study
window.
# CohortIncidence 3.0.1
Bug Fixes
Fixed issue when age stratify is false.
# CohortIncidence 3.0.0
Major Changes
This release introduces R6 classes to encapsulate the elements of an
Incidence Design. See documentation and vignettes for information on use
of these new classes. Note: the createXXX() methods which formerly
returned a jsonlite-compliant list now return R6 classes. Therefore, the
release was incremented by a major version.
# CohortIncidence 2.0.0
Major Changes
This release introduces new features and an altered results schema
table, requiring a major version increase.
Features:
New ‘strataSettings’ option in the CohortIncidence design that can
stratify by age, gender and start year.
New ‘useTempTable’ option to do everything in temp tables, with an
additional ‘cleanup’ function to remove tables post-execution.
incidence_summary table had some columns renamed for clarity
Results schema has columns and column values changed (example:
TAR_START_INDEX 0=end, 1=start changed to TAR_START_WITH ‘start’ = start
and ‘end’ = end)
# CohortIncidence 1.0.1
Bugfixes:
Fixed missing date padding by adding +1 to sum(start-end).
Fixed lean window dates by setting timespan to start+1 ..
end+cleanWindow
# CohortIncidence 1.0.0
Initial Release Including:
Java implementation
Standard object model for defining CohortIncidence design.
Test cases
Need a high-speed mirror for your open-source project?
Contact our mirror admin team at info@clientvps.com.