Dear Emacs, please make this -*-Text-*- mode!
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* 3.4 SERIES NEWS *
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CHANGES IN R VERSION 3.4.0
NEW FEATURES
o Added "cosine" distance as a reasonable metric.
CHANGES IN R VERSION 3.3.13
BUG FIXES
o Not exactly sure if this qualifies as a bug fix: modified one
of the man pages to remove an unnecessary cross-reference to a
package that might not be available.
CHANGES IN R VERSION 3.3.10
BUG FIXES
o Not exactly sure if this qualifies as a bug fix: modified some
of the test scripts so that they don't raise errors (because
of not matching the output) on a few of the extra installations
tested by CRAN. The underlying issue appears to be in the
results of "hclust", which finds the same groups but assigns
them different cluster-labels on some machines.
CHANGES IN R VERSION 3.3.8
UPDATES
o Modified use of S4 classes to avoid deprecated and discouraged elements.
CHANGES IN R VERSION 3.3.0
FEATURES
o Added S4 methods "identify" and "text" for the SamplePCA class.
CHANGES IN R VERSION 3.2.0
BREAKING CHANGES
o Finished creating a separate package for the bimodalIndex
function, and so removed duplicate code from here.
CHANGES IN R VERSION 3.1.0
BREAKING CHANGES
o Refactored to move the lungData set out of this package into
the newly organized "oompaData" package.
ADMINISTRATIVE
o Changed the LICENSE to Apache 2.0.
CHANGES IN R VERSION 3.0.1
GENERAL
o Moved to R-Forge.
BUG FIXES
o Made compatible with new R check steps that verify DESCRIPTION
and NAMESPACE dependencies.
o Replaced use of 'plclust' (newly deprecated in R) with 'plot'.
CHANGES IN R VERSION 3.0.0
REFACTORING CHANGES
o Removed the dependence on the PreProcess package.
CHANGES IN R VERSION 2.14.1
BUG FIXES
o Moved the previously added .Rout.save files to correct directory.
o Added 'TailRank' dependency to Suggests: (used in tests).
o Replaced platform-specific windows() method with dev.new() method
to invoke default graphics device instead.
CHANGES IN R VERSION 2.14.0
NEW FEATURES
o Added .Rout.save files for the ClassComparison tests.
o Added test for the bimodalIndex function.
o Created tests for ClassDiscovery from /inst/samples.
o Moved vignettes from /inst/doc to /vignettes.
o Added optional argument to screeplot() method.
CHANGES IN R VERSION 2.13.4
BUG FIXES
o Corrected spelling in documentation.
CHANGES IN R VERSION 2.10.0
NEW FEATURES
o Modified 'bimodalIndex' function to return proportion of
samples in group 1 rather than proportion in larger group.
o Moved redgreen, jetColors, etc. into the oompaBase package.
BUG FIXES
o Fixed labeling error in 'bimodalIndex' function.
CHANGES IN R VERSION 2.9.0
NEW FEATURES
o Added support for computing the "bimodalIndex" as
defined by Wang et al. in Cancer Informatics.
o Added a subset of the Nature Medicine lung cancer dataset to
the package in order to provide meaningful examples for the
computation of the bimodality index.
o Added support for namespaces.