Implement various chromosomal instability metrics. 'CINmetrics' (Chromosomal INstability metrics) provides functions to calculate various chromosomal instability metrics on masked Copy Number Variation(CNV) data at individual sample level. The chromosomal instability metrics have been implemented as described in the following studies: Baumbusch LO et al. 2013 <doi:10.1371/journal.pone.0054356>, Davidson JM et al. 2014 <doi:10.1371/journal.pone.0079079>, Chin SF et al. 2007 <doi:10.1186/gb-2007-8-10-r215>.
| Version: | 0.1.0 |
| Depends: | R (≥ 2.10), stats |
| Suggests: | knitr, rmarkdown |
| Published: | 2021-08-02 |
| DOI: | 10.32614/CRAN.package.CINmetrics |
| Author: | Vishal H. Oza, Roshan Darji, Brittany N. Lasseigne |
| Maintainer: | Vishal H. Oza <vishoza at uab.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | CINmetrics results |
| Reference manual: | CINmetrics.html , CINmetrics.pdf |
| Vignettes: |
CINmetrics (source, R code) |
| Package source: | CINmetrics_0.1.0.tar.gz |
| Windows binaries: | r-devel: CINmetrics_0.1.0.zip, r-release: CINmetrics_0.1.0.zip, r-oldrel: CINmetrics_0.1.0.zip |
| macOS binaries: | r-release (arm64): CINmetrics_0.1.0.tgz, r-oldrel (arm64): CINmetrics_0.1.0.tgz, r-release (x86_64): CINmetrics_0.1.0.tgz, r-oldrel (x86_64): CINmetrics_0.1.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=CINmetrics to link to this page.
Need a high-speed mirror for your open-source project?
Contact our mirror admin team at info@clientvps.com.
This archive is provided as a free public service to the community.
Proudly supported by infrastructure from VPSPulse , RxServers , BuyNumber , UnitVPS , OffshoreName and secure payment technology by ArionPay.