BioThermR: an R package for standardized processing, visualization, and statistical analysis of thermal imaging data in animal studies

BioThermR is an R package designed to provide an end-to-end analysis pipeline for infrared thermography (IRT) data in animal experimentation. It addresses the lack of standardized, reproducible, and batch-processing workflows in current thermal imaging analysis.

Find out more at https://github.com/RightSZ/BioThermR

Installation

BioThermR relies on EBImage from Bioconductor for image processing. Please install it first:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBImage")

Install the latest development version from GitHub as follow:

if (!require("devtools", quietly = TRUE))
    install.packages("devtools")
devtools::install_github("RightSZ/BioThermR")

CRAN availability

Submission to CRAN is currently in progress. The package will be available on CRAN upon acceptance.

License

This package is licensed under the GPL-3.0 License. See the LICENSE file for details.