Multiplicity of Infection and Allele Frequency Recovery from Noisy Polyallelic Genetics Data R package moire version 3.7.0 A Markov Chain Monte Carlo (MCMC) based approach to Bayesian estimation of individual level multiplicity of infection, within host relatedness, and population allele frequencies from polyallelic genetic data. Implements the model described in Murphy and Greenhouse (2024) <doi:10.1093/bioinformatics/btae619>. Software Depends: R (>= 4.1.0) Imports: Rcpp, RcppProgress, RcppParallel, dplyr, tidyr, stats, parallel, purrr, rlang, ggplot2 LinkingTo: Rcpp, RcppProgress, RcppParallel, BH Suggests: knitr, rmarkdown, forcats, testthat (>= 3.0.0), parallelly Maxwell Murphy <mm@maxmurphy.dev> Comprehensive R Archive Network (CRAN) Maxwell Murphy [aut, cre] (ORCID: <https://orcid.org/0000-0003-0332-4388>), Bryan Greenhouse [aut, ths] (ORCID: <https://orcid.org/0000-0003-0287-9111>) GPL (>= 3) 2026-09-26 application/tgz https://CRAN.R-project.org/package=moire doi:10.32614/CRAN.package.moire