Last updated on 2025-02-21 13:51:06 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.6 | 10.73 | 131.99 | 142.72 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0.6 | 8.32 | 73.77 | 82.09 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.6 | 223.67 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.6 | 233.66 | OK | |||
| r-devel-macos-arm64 | 1.0.6 | 93.00 | OK | |||
| r-devel-macos-x86_64 | 1.0.6 | 136.00 | OK | |||
| r-devel-windows-x86_64 | 1.0.6 | 13.00 | 159.00 | 172.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0.6 | 16.65 | 121.09 | 137.74 | OK | |
| r-release-linux-x86_64 | 1.0.6 | 9.65 | 122.80 | 132.45 | OK | |
| r-release-macos-arm64 | 1.0.6 | 85.00 | OK | |||
| r-release-macos-x86_64 | 1.0.6 | 107.00 | OK | |||
| r-release-windows-x86_64 | 1.0.6 | 14.00 | 150.00 | 164.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.6 | 69.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.6 | 200.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.6 | 16.00 | 200.00 | 216.00 | OK |
Version: 1.0.6
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
graph_pairs.Rd: graphNEL
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.0.6
Check: for unstated dependencies in ‘demo’
Result: NOTE
'library' or 'require' calls not declared from:
‘crop’ ‘mvtnorm’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.6
Check: examples
Result: ERROR
Running examples in ‘zenplots-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: graph_pairs
> ### Title: Turn pairs or paths into a graph
> ### Aliases: graph_pairs
>
> ### ** Examples
>
> ## To display the graphs constructed the packages
> ## graph and Rgraphviz packages need to be loaded
> library(graph)
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: ‘generics’
The following objects are masked from ‘package:base’:
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
> library(Rgraphviz)
Error in library(Rgraphviz) : there is no package called ‘Rgraphviz’
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘intro.Rmd’ using rmarkdown
Quitting from lines 98-102 [unnamed-chunk-7] (intro.Rmd)
Error: processing vignette 'intro.Rmd' failed with diagnostics:
there is no package called 'Rgraphviz'
--- failed re-building ‘intro.Rmd’
--- re-building ‘selected_features.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-2-1.png
576x768 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 43726 bytes
Input file size = 44644 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41670
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 41365
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 41008
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 3 f = 0 IDAT size = 41008
Output IDAT size = 41008 bytes (2718 bytes decrease)
Output file size = 41086 bytes (3558 bytes = 7.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-3-1.png
576x768 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10399 bytes
Input file size = 11269 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9094
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9094
Output IDAT size = 9094 bytes (1305 bytes decrease)
Output file size = 9172 bytes (2097 bytes = 18.61% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-7-1.png
768x1276 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 20322 bytes
Input file size = 21204 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18364
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18364
Output IDAT size = 18364 bytes (1958 bytes decrease)
Output file size = 18442 bytes (2762 bytes = 13.03% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-8-1.png
768x768 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 17673 bytes
Input file size = 18555 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15985
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15985
Output IDAT size = 15985 bytes (1688 bytes decrease)
Output file size = 16063 bytes (2492 bytes = 13.43% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-9-1.png
768x633 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 17300 bytes
Input file size = 18182 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15548
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15548
Output IDAT size = 15548 bytes (1752 bytes decrease)
Output file size = 15626 bytes (2556 bytes = 14.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-10-1.png
768x518 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 12859 bytes
Input file size = 13726 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11635
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11635
Output IDAT size = 11635 bytes (1224 bytes decrease)
Output file size = 11713 bytes (2013 bytes = 14.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-11-1.png
576x960 pixels, 8 bits/pixel, 253 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10034 bytes
Input file size = 10895 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8677
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8677
Output IDAT size = 8677 bytes (1357 bytes decrease)
Output file size = 8755 bytes (2140 bytes = 19.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-12-1.png
576x672 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 9332 bytes
Input file size = 10202 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7750
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7750
Output IDAT size = 7750 bytes (1582 bytes decrease)
Output file size = 7828 bytes (2374 bytes = 23.27% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-20-1.png
576x864 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 104172 bytes
Input file size = 105174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 100235
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 100150
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 100150
Output IDAT size = 100150 bytes (4022 bytes decrease)
Output file size = 100228 bytes (4946 bytes = 4.70% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-23-1.png
576x768 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 66445 bytes
Input file size = 67399 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63860
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63860
Output IDAT size = 63860 bytes (2585 bytes decrease)
Output file size = 63938 bytes (3461 bytes = 5.14% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/zenplots.Rcheck/vign_test/zenplots/vignettes/selected_features_files/figure-html/unnamed-chunk-24-1.png
576x768 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 29362 bytes
Input file size = 30256 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27518
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27518
Output IDAT size = 27518 bytes (1844 bytes decrease)
Output file size = 27596 bytes (2660 bytes = 8.79% decrease)
Quitting from lines 249-252 [unnamed-chunk-28] (selected_features.Rmd)
Error: processing vignette 'selected_features.Rmd' failed with diagnostics:
there is no package called 'Rgraphviz'
--- failed re-building ‘selected_features.Rmd’
SUMMARY: processing the following files failed:
‘intro.Rmd’ ‘selected_features.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc