CRAN Package Check Results for Maintainer ‘July Pilowsky <pilowskyj at caryinstitute.org>’

Last updated on 2025-12-07 07:50:41 CET.

Package ERROR WARN NOTE OK
colorednoise 1 9 3
epizootic 1 12
paleopop 2 1 1 9
poems 1 12

Package colorednoise

Current CRAN status: ERROR: 1, NOTE: 9, OK: 3

Version: 1.1.2
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘simulate_populations.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.1.2
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'knitr', 'rmarkdown', 'covr', 'pkgdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.2
Check: examples
Result: ERROR Running examples in ‘colorednoise-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: autocorr_sim > ### Title: Simulate Temporally Autocorrelated Populations for Every > ### Combination of Parameters > ### Aliases: autocorr_sim > > ### ** Examples > > survival_range <- autocorr_sim(timesteps = 30, start = 200, survPhi = 0.3, fecundPhi = 0.1, + survMean = c(0.2, 0.3, 0.4, 0.5, 0.6), survSd = 0.5, + fecundMean = 1.1, fecundSd = 0.5, replicates = 50) Warning: `rerun()` was deprecated in purrr 1.0.0. ℹ Please use `map()` instead. # Previously rerun(50, ., pmap(., unstructured_pop)) # Now map(1:50, ~ list(., pmap(., unstructured_pop))) ℹ The deprecated feature was likely used in the colorednoise package. Please report the issue at <https://github.com/japilo/colorednoise/issues>. Warning: `cross_df()` was deprecated in purrr 1.0.0. ℹ Please use `tidyr::expand_grid()` instead. ℹ See <https://github.com/tidyverse/purrr/issues/768>. ℹ The deprecated feature was likely used in the colorednoise package. Please report the issue at <https://github.com/japilo/colorednoise/issues>. Error in cross_df(list(start = start, timesteps = timesteps, survPhi = survPhi, : The package "tibble" is required. Calls: autocorr_sim ... eval_dots -> lapply -> FUN -> cross_df -> check_installed Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.2
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc

Package epizootic

Current CRAN status: WARN: 1, OK: 12

Version: 2.0.0
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'knitr', 'rmarkdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.0.0
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc

Package paleopop

Current CRAN status: ERROR: 2, WARN: 1, NOTE: 1, OK: 9

Version: 2.1.7
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'knitr', 'rmarkdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.7
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘bison_example.Rmd’ using rmarkdown OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.1.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘bison_example.Rmd’ using rmarkdown Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.1.7
Check: installed package size
Result: NOTE installed size is 5.2Mb sub-directories of 1Mb or more: data 4.5Mb Flavor: r-oldrel-macos-x86_64

Package poems

Current CRAN status: WARN: 1, OK: 12

Version: 1.4.0
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'knitr', 'rmarkdown' VignetteBuilder packages required for checking but not installed: 'knitr', 'rmarkdown' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.4.0
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc