Last updated on 2025-12-07 07:50:41 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| ApplyPolygenicScore | 1 | 12 | ||
| bedr | 1 | 12 | ||
| BoutrosLab.plotting.general | 1 | 12 | ||
| CancerEvolutionVisualization | 1 | 12 | ||
| ISOpureR | 1 | 12 | ||
| iSubGen | 1 | 1 | 11 | |
| OmicsQC | 1 | 12 | ||
| OutSeekR | 1 | 12 | ||
| SeqKat | 1 | 2 | 10 | |
| VennDiagram | 2 | 11 |
Current CRAN status: WARN: 1, OK: 12
Version: 4.0.0
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.0.0
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, OK: 12
Version: 1.1.3
Check: package dependencies
Result: ERROR
Package required but not available: ‘yaml’
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, OK: 12
Version: 7.1.2
Check: package dependencies
Result: ERROR
Package suggested but not available for checking: ‘knitr’
VignetteBuilder package required for checking but not installed: ‘knitr’
Files named as vignettes but with no recognized vignette engine:
‘inst/doc/PlottingGuide.Rnw’
(Is a VignetteBuilder field missing?)
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: WARN: 1, OK: 12
Version: 2.0.1
Check: package dependencies
Result: WARN
Cannot process vignettes
Package suggested but not available for checking: ‘knitr’
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.0.1
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, NOTE: 12
Version: 1.1.3
Check: Rd files
Result: NOTE
checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:9: Escaped LaTeX specials: \$
checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:14: Escaped LaTeX specials: \$
checkRd: (-1) ISOpureS1.model_optimize.kappa.kappa_loglikelihood.Rd:11: Escaped LaTeX specials: \$
checkRd: (-1) ISOpureS2.model_optimize.kappa.kappa_deriv_loglikelihood.Rd:11: Escaped LaTeX specials: \$
checkRd: (-1) ISOpureS2.model_optimize.kappa.kappa_loglikelihood.Rd:11: Escaped LaTeX specials: \$
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.1.3
Check: package dependencies
Result: ERROR
Package suggested but not available for checking: ‘knitr’
VignetteBuilder package required for checking but not installed: ‘knitr’
Files named as vignettes but with no recognized vignette engine:
‘inst/doc/ISOpureRGuide.Rnw’
(Is a VignetteBuilder field missing?)
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 1.0.1
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Paul C Boutros <pboutros@mednet.ucla.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Natalie",
family = "Fox",
role = "aut"),
person(given = c("Paul", "C"),
family = "Boutros",
role = "cre",
email = "pboutros@mednet.ucla.edu"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.1
Check: package dependencies
Result: ERROR
Packages required but not available: 'keras', 'tensorflow'
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Files named as vignettes but with no recognized vignette engine:
‘inst/doc/iSubGenGuide.Rnw’
(Is a VignetteBuilder field missing?)
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: WARN: 1, OK: 12
Version: 1.1.0
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'knitr', 'rmarkdown', 'kableExtra'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.0
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: WARN: 1, OK: 12
Version: 1.0.0
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: WARN: 1, NOTE: 2, OK: 10
Version: 0.0.8
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Paul C. Boutros <pboutros@mednet.ucla.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Fouad",
family = "Yousif",
role = "aut"),
person(given = "Xihui",
family = "Lin",
role = "aut"),
person(given = "Fan",
family = "Fan",
role = "aut"),
person(given = "Christopher",
family = "Lalansingh",
role = "aut"),
person(given = "John",
family = "Macdonald",
role = "aut"),
person(given = c("Paul", "C."),
family = "Boutros",
role = "cre",
email = "pboutros@mednet.ucla.edu"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.0.8
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'rmarkdown', 'knitr'
VignetteBuilder packages required for checking but not installed:
'rmarkdown', 'knitr'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.0.8
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.0.8
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'doMC'
Flavor: r-oldrel-windows-x86_64
Current CRAN status: NOTE: 2, OK: 11
Version: 1.7.3
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Paul Boutros <pboutros@mednet.ucla.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Hanbo",
family = "Chen",
role = "aut"),
person(given = "Paul",
family = "Boutros",
role = "cre",
email = "pboutros@mednet.ucla.edu"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc