CRAN Package Check Results for Package ngme2

Last updated on 2026-05-19 05:50:33 CEST.

Check Details

Version: 0.9.7
Check: tests
Result: ERROR Running ‘testthat.R’ [90m/60m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > > test_check("ngme2") Loading required package: ngme2 This is ngme2 of version 0.9.7 - See our homepage: https://davidbolin.github.io/ngme2 for more details. Attaching package: 'ngme2' The following object is masked from 'package:stats': ar List of 6 $ mean : num [1:3] -1.714 0.601 -2.309 $ sd : num [1:3] 0.649 0.709 0.745 $ 0.05q : num [1:3] -2.848 -0.475 -3.536 $ 0.95q : num [1:3] -0.665 1.881 -1.053 $ median: num [1:3] -1.68 0.579 -2.328 $ mode : num [1:3] -1.7 0.7 -2.3 - attr(*, "samples")= num [1:10, 1:500] -1.97 -1.4 -2.86 -1.91 2.13 ... Starting estimation... iteration = : 1 grad.norm() = 501.376 pflug_sum = 0, max_pflug_sum = 0 --------------------------- iteration = : 2 grad.norm() = 476.742 pflug_sum = 237746, max_pflug_sum = 237746 --------------------------- iteration = : 3 grad.norm() = 455.975 pflug_sum = 454841, max_pflug_sum = 454841 --------------------------- iteration = : 4 grad.norm() = 432.803 pflug_sum = 651102, max_pflug_sum = 651102 --------------------------- iteration = : 5 grad.norm() = 406.72 pflug_sum = 826007, max_pflug_sum = 826007 --------------------------- iteration = : 6 grad.norm() = 377.379 pflug_sum = 978867, max_pflug_sum = 978867 --------------------------- iteration = : 7 grad.norm() = 343.428 pflug_sum = 1.10801e+06, max_pflug_sum = 1.10801e+06 --------------------------- iteration = : 8 grad.norm() = 311.455 pflug_sum = 1.21419e+06, max_pflug_sum = 1.21419e+06 --------------------------- iteration = : 9 grad.norm() = 277.077 pflug_sum = 1.29945e+06, max_pflug_sum = 1.29945e+06 --------------------------- iteration = : 10 grad.norm() = 234.641 pflug_sum = 1.36396e+06, max_pflug_sum = 1.36396e+06 --------------------------- Starting posterior sampling... Posterior sampling done. Average standard deviation of the posterior W: 0.258462916652804 Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters. OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.9.7
Check: tests
Result: ERROR Running ‘testthat.R’ [89m/57m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > > test_check("ngme2") Loading required package: ngme2 This is ngme2 of version 0.9.7 - See our homepage: https://davidbolin.github.io/ngme2 for more details. Attaching package: 'ngme2' The following object is masked from 'package:stats': ar List of 6 $ mean : num [1:3] -1.91 0.872 -1.786 $ sd : num [1:3] 0.819 0.883 0.913 $ 0.05q : num [1:3] -3.319 -0.552 -3.285 $ 0.95q : num [1:3] -0.616 2.427 -0.311 $ median: num [1:3] -1.925 0.832 -1.773 $ mode : num [1:3] -2.1 0.7 -1.3 - attr(*, "samples")= num [1:10, 1:500] -2.55 -2.68 -2.49 -1.03 1.37 ... Starting estimation... iteration = : 1 grad.norm() = 510.602 pflug_sum = 0, max_pflug_sum = 0 --------------------------- iteration = : 2 grad.norm() = 492.299 pflug_sum = 251045, max_pflug_sum = 251045 --------------------------- iteration = : 3 grad.norm() = 469.964 pflug_sum = 481846, max_pflug_sum = 481846 --------------------------- iteration = : 4 grad.norm() = 446.523 pflug_sum = 690563, max_pflug_sum = 690563 --------------------------- iteration = : 5 grad.norm() = 426.966 pflug_sum = 880245, max_pflug_sum = 880245 --------------------------- iteration = : 6 grad.norm() = 402.026 pflug_sum = 1.05096e+06, max_pflug_sum = 1.05096e+06 --------------------------- iteration = : 7 grad.norm() = 374.862 pflug_sum = 1.20079e+06, max_pflug_sum = 1.20079e+06 --------------------------- iteration = : 8 grad.norm() = 343.747 pflug_sum = 1.32916e+06, max_pflug_sum = 1.32916e+06 --------------------------- iteration = : 9 grad.norm() = 301.75 pflug_sum = 1.43184e+06, max_pflug_sum = 1.43184e+06 --------------------------- iteration = : 10 grad.norm() = 274.148 pflug_sum = 1.51433e+06, max_pflug_sum = 1.51433e+06 --------------------------- Starting posterior sampling... Posterior sampling done. Average standard deviation of the posterior W: 0.23958483681876 Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters. Flavor: r-devel-linux-x86_64-fedora-gcc