Last updated on 2025-11-03 07:48:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 268.38 | 279.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 18.00 | 188.00 | 206.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 174.00 | 185.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.073, elapsed: 2.689 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.764, system: 0.244, elapsed: 15.399 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.019, elapsed: 0.340 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.919, system: 0.213, elapsed: 5.801 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.335, system: 0.580, elapsed: 25.312 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.038, elapsed: 2.197 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.527, system: 0.149, elapsed: 14.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.019, elapsed: 0.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.209, system: 0.313, elapsed: 7.051 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.007, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.237, system: 0.554, elapsed: 25.770 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.823, system: 0.094, elapsed: 2.375 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.846, system: 0.372, elapsed: 15.197 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.386 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.938, system: 0.191, elapsed: 6.842 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.336 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.238, system: 0.235, elapsed: 1.372 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.857, system: 0.935, elapsed: 27.539 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.038, elapsed: 2.431 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.508, system: 0.097, elapsed: 15.332 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.406 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.022, system: 0.206, elapsed: 6.872 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.804, system: 0.519, elapsed: 21.633 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.959, system: 0.913, elapsed: 48.202 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.727, system: 0.074, elapsed: 2.801 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.576, system: 0.275, elapsed: 14.492 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.019, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.860, system: 0.277, elapsed: 4.629 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.010, elapsed: 0.209 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.085, system: 0.692, elapsed: 23.218 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.736, system: 0.074, elapsed: 2.249 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.624, system: 0.285, elapsed: 14.349 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.015, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.936, system: 0.242, elapsed: 5.638 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.011, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.231, system: 0.672, elapsed: 23.760 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.850, system: 0.090, elapsed: 2.392 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.862, system: 0.439, elapsed: 13.609 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.015, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.192, elapsed: 6.036 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.020, elapsed: 0.348 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.127, system: 0.261, elapsed: 0.912 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.588, system: 1.059, elapsed: 24.423 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.688, system: 0.058, elapsed: 2.205 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.461, system: 0.099, elapsed: 11.707 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.727, system: 0.164, elapsed: 9.016 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.474 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.731, system: 0.473, elapsed: 16.943 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.642, system: 0.837, elapsed: 41.812 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64