Last updated on 2025-11-24 07:50:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.68 | 238.22 | 250.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.16 | 250.28 | 260.44 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 70.00 | 267.40 | 337.40 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 82.00 | 336.78 | 418.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 28.00 | 348.00 | 376.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 30.00 | 403.00 | 433.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [97s/223s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.969, system: 0.173, elapsed: 4.989 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.304, system: 0.431, elapsed: 30.351 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.026, elapsed: 0.449 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.314, system: 0.375, elapsed: 10.977 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.009, elapsed: 0.453 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.668, system: 1.358, elapsed: 49.489 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.700, system: 0.084, elapsed: 3.985 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.318, system: 0.432, elapsed: 28.714 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.027, elapsed: 0.414 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.441, system: 0.412, elapsed: 11.151 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.018, elapsed: 0.516 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.541, system: 1.337, elapsed: 46.841 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.840, system: 0.100, elapsed: 4.796 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.330, system: 0.378, elapsed: 23.725 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.035, elapsed: 0.504 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.353, system: 0.390, elapsed: 9.245 seconds]
Computing values for grid cells...
... done. [user: 0.204, system: 0.027, elapsed: 0.303 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.423, system: 0.413, elapsed: 2.664 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.156, system: 1.718, elapsed: 43.712 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.852, system: 0.134, elapsed: 5.250 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.238, system: 0.314, elapsed: 22.361 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.034, elapsed: 0.575 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.479, system: 0.415, elapsed: 9.364 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.011, elapsed: 0.267 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.260, system: 1.267, elapsed: 28.912 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.053, system: 2.541, elapsed: 69.859 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [96s/276s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.898, system: 0.124, elapsed: 5.948 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.236, system: 0.343, elapsed: 26.095 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.033, elapsed: 0.744 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.342, system: 0.422, elapsed: 11.307 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.017, elapsed: 0.518 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.569, system: 1.168, elapsed: 47.141 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.865, system: 0.105, elapsed: 5.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.082, system: 0.303, elapsed: 26.170 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.038, elapsed: 1.034 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.315, system: 0.421, elapsed: 13.357 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.011, elapsed: 0.566 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.362, system: 1.184, elapsed: 50.136 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.792, system: 0.080, elapsed: 4.398 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.148, system: 0.288, elapsed: 30.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.036, elapsed: 0.921 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.130, system: 0.372, elapsed: 13.129 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.013, elapsed: 0.620 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.272, system: 0.416, elapsed: 3.020 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.582, system: 1.564, elapsed: 56.351 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.878, system: 0.106, elapsed: 6.499 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.286, system: 0.402, elapsed: 33.646 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.037, elapsed: 0.637 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.165, system: 0.509, elapsed: 15.571 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.007, elapsed: 0.495 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.907, system: 1.223, elapsed: 41.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.480, system: 2.732, elapsed: 102.203 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64