Last updated on 2025-08-31 15:48:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.56 | 267.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.86 | 204.71 | 215.57 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.57 | 261.65 | 275.22 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 254.59 | 269.60 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 142.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 22.00 | 234.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/95s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.073, elapsed: 2.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.736, system: 0.189, elapsed: 11.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.019, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.565, system: 0.215, elapsed: 4.371 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.007, elapsed: 0.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.788, system: 0.535, elapsed: 19.152 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.049, elapsed: 1.696 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.537, system: 0.137, elapsed: 10.124 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.015, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.589, system: 0.213, elapsed: 4.523 seconds]
Computing values for grid cells...
... done. [user: 0.150, system: 0.004, elapsed: 0.184 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.438, system: 0.441, elapsed: 17.334 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.327, system: 0.024, elapsed: 1.378 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.680, system: 0.084, elapsed: 8.484 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.176, system: 0.010, elapsed: 0.192 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.778, system: 0.242, elapsed: 4.919 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.219 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.187, system: 0.222, elapsed: 0.991 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.905, system: 0.614, elapsed: 16.976 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.051, elapsed: 1.681 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.034, system: 0.273, elapsed: 12.023 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.176, system: 0.012, elapsed: 0.196 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.877, system: 0.278, elapsed: 5.109 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.009, elapsed: 0.212 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.155, system: 0.558, elapsed: 14.672 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.550, system: 1.221, elapsed: 34.696 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.046, elapsed: 2.370 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.997, system: 0.097, elapsed: 12.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.578, system: 0.187, elapsed: 5.306 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.208 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.034, system: 0.369, elapsed: 21.745 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.032, elapsed: 2.040 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.148, system: 0.213, elapsed: 12.998 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.016, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.880, system: 0.260, elapsed: 5.602 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.396, system: 0.562, elapsed: 21.862 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.817, system: 0.096, elapsed: 2.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.074, system: 0.196, elapsed: 21.609 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.476 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.579, system: 0.205, elapsed: 7.909 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.018, elapsed: 0.413 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.254, elapsed: 1.551 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.516, system: 0.820, elapsed: 35.759 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.052, elapsed: 3.552 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.001, system: 0.105, elapsed: 14.776 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.510, system: 0.159, elapsed: 5.737 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.232 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.094, system: 0.483, elapsed: 14.360 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.128, system: 0.842, elapsed: 40.231 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64