Last updated on 2026-01-30 07:48:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.47 | 256.22 | 269.69 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.58 | 232.37 | 242.95 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.74 | 266.72 | 282.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 535.00 | 545.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 574.00 | 585.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 241.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/485s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.055, elapsed: 2.872 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.516, system: 0.091, elapsed: 11.404 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.016, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.756, system: 0.699, elapsed: 30.603 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.886, system: 0.891, elapsed: 46.126 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.039, elapsed: 1.664 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.600, system: 0.226, elapsed: 12.812 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.256, system: 0.028, elapsed: 0.355 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.250, system: 0.816, elapsed: 19.728 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.211 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.475, system: 1.160, elapsed: 35.560 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.774, system: 0.087, elapsed: 2.566 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.823, system: 0.305, elapsed: 15.737 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.312, system: 0.017, elapsed: 1.452 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.165, system: 0.900, elapsed: 137.020 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.011, elapsed: 0.409 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.277, system: 0.362, elapsed: 1.889 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.227, system: 1.733, elapsed: 160.431 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.033, elapsed: 3.528 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.547, system: 0.048, elapsed: 19.607 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 1.137 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.038, system: 0.927, elapsed: 162.344 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.003, elapsed: 0.330 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.279, system: 0.626, elapsed: 45.114 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.525, system: 1.679, elapsed: 233.467 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [106s/501s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.583, system: 0.040, elapsed: 4.770 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.568, system: 0.051, elapsed: 26.293 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.020, elapsed: 1.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.945, system: 0.978, elapsed: 181.564 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.623 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.056, system: 1.117, elapsed: 216.091 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.027, elapsed: 5.505 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.057, elapsed: 30.603 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.018, elapsed: 1.236 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.044, system: 0.860, elapsed: 147.639 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.005, elapsed: 0.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.249, system: 0.993, elapsed: 186.661 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.046, elapsed: 2.017 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.556, system: 0.150, elapsed: 14.599 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.017, elapsed: 0.438 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.303, system: 0.805, elapsed: 17.845 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.597 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.214, system: 0.299, elapsed: 2.061 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.785, system: 1.349, elapsed: 38.584 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.687, system: 0.048, elapsed: 4.896 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.126, elapsed: 14.895 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.384, system: 0.025, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.002, system: 0.878, elapsed: 7.573 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.172 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.544, system: 0.856, elapsed: 18.408 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 35.114, system: 1.969, elapsed: 47.386 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64