Last updated on 2025-10-14 09:51:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.88 | 251.71 | 262.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 208.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 205.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/145s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.474, system: 0.042, elapsed: 2.165 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.045, system: 0.086, elapsed: 16.080 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.192, elapsed: 6.653 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.322 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.161, system: 0.361, elapsed: 26.453 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.453, system: 0.030, elapsed: 3.399 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.975, system: 0.074, elapsed: 15.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.012, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.718, system: 0.151, elapsed: 6.144 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.002, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.025, system: 0.289, elapsed: 26.581 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.026, elapsed: 2.209 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.901, system: 0.086, elapsed: 18.547 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.676 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.765, system: 0.176, elapsed: 11.133 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.527 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.162, system: 0.215, elapsed: 1.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.270, system: 0.538, elapsed: 36.497 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.033, elapsed: 3.701 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.098, system: 0.086, elapsed: 16.861 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.798, system: 0.185, elapsed: 6.328 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.386 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.338, system: 0.463, elapsed: 18.058 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.733, system: 0.808, elapsed: 47.122 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.064, elapsed: 3.242 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.353, system: 0.292, elapsed: 18.210 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.020, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.887, system: 0.309, elapsed: 6.399 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.010, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.753, system: 0.730, elapsed: 29.401 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.069, elapsed: 2.898 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.138, system: 0.157, elapsed: 15.898 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.726, system: 0.186, elapsed: 6.679 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.451, system: 0.465, elapsed: 26.813 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.030, elapsed: 2.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.883, system: 0.095, elapsed: 14.451 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.605, system: 0.174, elapsed: 7.080 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.015, elapsed: 0.275 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.038, system: 0.232, elapsed: 0.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.002, system: 0.587, elapsed: 26.318 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.450, system: 0.027, elapsed: 2.134 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.949, system: 0.067, elapsed: 14.756 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.550, system: 0.158, elapsed: 5.626 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.286 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.011, system: 0.460, elapsed: 16.607 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.944, system: 0.752, elapsed: 40.730 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64